Andre S Ribeiro

ResearcherID Ciência ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 17

Top Venues

mSystems

Nucleic acids research

Biochemistry

The Journal of neuroscience : the official journal of the Society for Neuroscience

Tampere University

Instituto Superior Tecnico, Technical University of Lisbon (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Tampere University Jul 01 2017

Finland

Professor (tenured) :: Faculty of Medicine and Health Technology (MET)

Centre of Technology and Systems (CTS), New University of Lisbon

Portugal

External Collaborator

Tampere University of Technology Jan 01 2015 - May 31 2017

Finland

Associate Professor :: Biomeditech Institute

Tampere University of Technology - Dec 31 2014

Finland

Assistant Professor (tenure track) :: Department of Signal Processing

Computational Systems Biology Research Group, Tampere University of Technology

Finland

Assistant Professor :: Department of Signal Processing

Computational Systems Biology Research Group, Tampere University of Technology

Finland

Senior Researcher :: Department of Signal Processing

Institute for Biocomplexity and Informatics, University of Calgary

Canada

Post-Doctoral Fellow :: Departments of Physics and Astronomy and of Biological Sciences

Research Unit “Centre for Computational Physics”

Portugal

External Collaborator :: Department of Physics

Education History

Instituto Superior Tecnico, Technical University of Lisbon

Portugal

PHD

Publications

Vatsala Chauhan, Ines S C Baptista, Amir M Arsh, Rahul Jagadeesan, Suchintak Dash, Andre S Ribeiro
Transcription Attenuation in Synthetic Promoters in Nonoverlapping Tandem Formation. Biochemistry 63 (16) (2024)
Suchintak Dash, Rahul Jagadeesan, Ines S C Baptista, Vatsala Chauhan, Vinodh Kandavalli, Samuel M D Oliveira, Andre S Ribeiro
A library of reporters of the global regulators of gene expression in Escherichia coli . mSystems 9 (6) (2024)
Vatsala Chauhan, Ines S C Baptista, Amir M Arsh, Rahul Jagadeesan, Suchintak Dash, Andre S Ribeiro
Transcription Attenuation in Synthetic Promoters in Nonoverlapping Tandem Formation. Biochemistry 63 (16) (2024)
Vatsala Chauhan, Ines S C Baptista, Amir M Arsh, Rahul Jagadeesan, Suchintak Dash, Andre S Ribeiro
Transcription Attenuation in Synthetic Promoters in Nonoverlapping Tandem Formation. Biochemistry (2024)
Suchintak Dash, Rahul Jagadeesan, Ines S C Baptista, Vatsala Chauhan, Vinodh Kandavalli, Samuel M D Oliveira, Andre S Ribeiro
A library of reporters of the global regulators of gene expression in Escherichia coli . mSystems 9 (6) (2024)
Suchintak Dash, Rahul Jagadeesan, Ines S C Baptista, Vatsala Chauhan, Vinodh Kandavalli, Samuel M D Oliveira, Andre S Ribeiro
A library of reporters of the global regulators of gene expression in Escherichia coli . mSystems 9 (6) (2024)
Suchintak Dash, Rahul Jagadeesan, Ines S C Baptista, Vatsala Chauhan, Vinodh Kandavalli, Samuel M D Oliveira, Andre S Ribeiro
A library of reporters of the global regulators of gene expression in Escherichia coli . mSystems 9 (6) (2024)
Suchintak Dash, Rahul Jagadeesan, Ines S C Baptista, Vatsala Chauhan, Vinodh Kandavalli, Samuel M D Oliveira, Andre S Ribeiro
A library of reporters of the global regulators of gene expression in Escherichia coli . mSystems (2024)
Vatsala Chauhan, Ines S C Baptista, Amir M Arsh, Rahul Jagadeesan, Suchintak Dash, Andre S Ribeiro
Transcription Attenuation in Synthetic Promoters in Nonoverlapping Tandem Formation. Biochemistry 63 (16) (2024)
Bilena L B Almeida, Mohamed N M Bahrudeen, Vatsala Chauhan, Suchintak Dash, Vinodh Kandavalli, Antti Häkkinen, Jason Lloyd-Price, Palma S D Cristina, Ines S C Baptista, Abhishekh Gupta, Juha Kesseli, Eric Dufour, Olli-Pekka Smolander, Matti Nykter, Petri Auvinen, Howard Trevor Jacobs, Samuel M D Oliveira, Andre S Ribeiro
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration. Nucleic acids research 50 (12) (2022)
Bilena L B Almeida, Mohamed N M Bahrudeen, Vatsala Chauhan, Suchintak Dash, Vinodh Kandavalli, Antti Häkkinen, Jason Lloyd-Price, Palma S D Cristina, Ines S C Baptista, Abhishekh Gupta, Juha Kesseli, Eric Dufour, Olli-Pekka Smolander, Matti Nykter, Petri Auvinen, Howard Trevor Jacobs, Samuel M D Oliveira, Andre S Ribeiro
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration. Nucleic acids research 50 (12) (2022)
Bilena L B Almeida, Mohamed N M Bahrudeen, Vatsala Chauhan, Suchintak Dash, Vinodh Kandavalli, Antti Häkkinen, Jason Lloyd-Price, Palma S D Cristina, Ines S C Baptista, Abhishekh Gupta, Juha Kesseli, Eric Dufour, Olli-Pekka Smolander, Matti Nykter, Petri Auvinen, Howard Trevor Jacobs, Samuel M D Oliveira, Andre S Ribeiro
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration. Nucleic acids research 50 (12) (2022)
Vatsala Chauhan, Mohamed N M Bahrudeen, Cristina S D Palma, Ines S C Baptista, Bilena L B Almeida, Suchintak Dash, Vinodh Kandavalli, Andre S Ribeiro
Analytical kinetic model of native tandem promoters in E. coli. PLoS computational biology 18 (1) (2022)
Suchintak Dash, Cristina S D Palma, Ines S C Baptista, Bilena L B Almeida, Mohamed N M Bahrudeen, Vatsala Chauhan, Rahul Jagadeesan, Andre S Ribeiro
Alteration of DNA supercoiling serves as a trigger of short-term cold shock repressed genes of E. coli. Nucleic acids research 50 (15) (2022)
Bilena L B Almeida, Mohamed N M Bahrudeen, Vatsala Chauhan, Suchintak Dash, Vinodh Kandavalli, Antti Häkkinen, Jason Lloyd-Price, Palma S D Cristina, Ines S C Baptista, Abhishekh Gupta, Juha Kesseli, Eric Dufour, Olli-Pekka Smolander, Matti Nykter, Petri Auvinen, Howard Trevor Jacobs, Samuel M D Oliveira, Andre S Ribeiro
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration. Nucleic acids research 50 (12) (2022)
Mahendra Kumar Prajapat, Andre S Ribeiro
Added value of autoregulation and multi-step kinetics of transcription initiation. Royal Society open science 5 (11) (2018)
Mikhail Kislin, Jeremy Sword, Ioulia V Fomitcheva, Deborah Croom, Evgeny Pryazhnikov, Eero Lihavainen, Dmytro Toptunov, Heikki Rauvala, Andre S Ribeiro, Leonard Khiroug, Sergei A Kirov
Reversible Disruption of Neuronal Mitochondria by Ischemic and Traumatic Injury Revealed by Quantitative Two-Photon Imaging in the Neocortex of Anesthetized Mice. The Journal of neuroscience : the official journal of the Society for Neuroscience 37 (2) (2017)

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Publication Activity (10 Years)

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Andre S Ribeiro