Andrew J Spakowitz (Andy Spakowitz)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 30

Top Topics

Pulmonary Tuberculosis

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Science advances

The Journal of chemical physics

This page only lists publications with an associated author ORCID identifier.

Publications

Qingquan Chen, Pamela C Cai, Tony Hong-Wei Chang, Elizabeth B Burgener, Michael J Kratochvil, Aditi Gupta, Aviv Hargill, Patrick R Secor, Josefine Eilsø Nielsen, Annelise E Barron, Carlos Carlos Milla Milla, Sarah C Heilshorn, Andrew J Spakowitz, Paul L Bollyky
Pf bacteriophages hinder sputum antibiotic diffusion via electrostatic binding. Science advances 10 (22) (2024)
Pamela C Cai, Margaret Braunreuther, Audrey Shih, Andrew J Spakowitz, Gerald G Fuller, Sarah C Heilshorn
Air-liquid intestinal cell culture allows in situ rheological characterization of intestinal mucus. APL bioengineering 8 (2) (2024)
Joseph G Wakim, Andrew J Spakowitz
Physical modeling of nucleosome clustering in euchromatin resulting from interactions between epigenetic reader proteins. Proceedings of the National Academy of Sciences of the United States of America 121 (26) (2024)
Ashesh Ghosh, Andrew J Spakowitz
Local changes in protein filament properties drive large-scale membrane transformations involved in endosome tethering and fusion. Soft matter 20 (32) (2024)
Qingquan Chen, Pamela C Cai, Tony Hong-Wei Chang, Elizabeth B Burgener, Michael J Kratochvil, Aditi Gupta, Aviv Hargill, Patrick R Secor, Josefine Eilsø Nielsen, Annelise E Barron, Carlos Carlos Milla Milla, Sarah C Heilshorn, Andrew J Spakowitz, Paul L Bollyky
Pf bacteriophages hinder sputum antibiotic diffusion via electrostatic binding. Science advances 10 (22) (2024)
Qingquan Chen, Pamela C Cai, Tony Hong-Wei Chang, Elizabeth B Burgener, Michael J Kratochvil, Aditi Gupta, Aviv Hargill, Patrick R Secor, Josefine Eilsø Nielsen, Annelise E Barron, Carlos Carlos Milla Milla, Sarah C Heilshorn, Andrew J Spakowitz, Paul L Bollyky
Pf bacteriophages hinder sputum antibiotic diffusion via electrostatic binding. Science advances 10 (22) (2024)
Qingquan Chen, Pamela C Cai, Tony Hong-Wei Chang, Elizabeth B Burgener, Michael J Kratochvil, Aditi Gupta, Aviv Hargill, Patrick R Secor, Josefine Eilsø Nielsen, Annelise E Barron, Carlos Carlos Milla Milla, Sarah C Heilshorn, Andrew J Spakowitz, Paul L Bollyky
Pf bacteriophages hinder sputum antibiotic diffusion via electrostatic binding. Science advances 10 (22) (2024)
Pamela C Cai, Margaret Braunreuther, Audrey Shih, Andrew J Spakowitz, Gerald G Fuller, Sarah C Heilshorn
Air-liquid intestinal cell culture allows in situ rheological characterization of intestinal mucus. APL bioengineering 8 (2) (2024)
Sayantan Dutta, Ashesh Ghosh, Andrew J Spakowitz
Effect of local active fluctuations on structure and dynamics of flexible biopolymers. Soft matter 20 (8) (2024)
Joseph G Wakim, Andrew J Spakowitz
Physical modeling of nucleosome clustering in euchromatin resulting from interactions between epigenetic reader proteins. Proceedings of the National Academy of Sciences of the United States of America 121 (26) (2024)
Sayantan Dutta, Ashesh Ghosh, Andrew J Spakowitz
Effect of local active fluctuations on structure and dynamics of flexible biopolymers. Soft matter 20 (8) (2024)
Sayantan Dutta, Ashesh Ghosh, Andrew J Spakowitz
Effect of local active fluctuations on structure and dynamics of flexible biopolymers. Soft matter (2024)
Elizabeth B Burgener, Pamela C Cai, Michael J Kratochvil, Laura S Rojas-Hernandez, Nam Soo Joo, Aditi Gupta, Patrick R Secor, Sarah C Heilshorn, Andrew J Spakowitz, Jeffrey J Wine, Paul L Bollyky, Carlos Carlos Milla Milla
The lysogenic filamentous Pseudomonas bacteriophage phage Pf slows mucociliary transport. PNAS nexus 3 (9) (2024)
Joseph G Wakim, Andrew J Spakowitz
Physical modeling of nucleosome clustering in euchromatin resulting from interactions between epigenetic reader proteins. Proceedings of the National Academy of Sciences of the United States of America 121 (26) (2024)
Qingquan Chen, Pamela C Cai, Tony Hong-Wei Chang, Elizabeth B Burgener, Michael J Kratochvil, Aditi Gupta, Aviv Hargill, Patrick R Secor, Josefine Eilsø Nielsen, Annelise E Barron, Carlos Carlos Milla Milla, Sarah C Heilshorn, Andrew J Spakowitz, Paul L Bollyky
Pf bacteriophages hinder sputum antibiotic diffusion via electrostatic binding. Science advances 10 (22) (2024)
Ariana Brenner Clerkin, Nicole Pagane, Devany W West, Andrew J Spakowitz, Viviana I Risca
Determining mesoscale chromatin structure parameters from spatially correlated cleavage data using a coarse-grained oligonucleosome model. bioRxiv : the preprint server for biology (2024)
Ariana Brenner Clerkin, Nicole Pagane, Devany W West, Andrew J Spakowitz, Viviana I Risca
Determining mesoscale chromatin structure parameters from spatially correlated cleavage data using a coarse-grained oligonucleosome model. bioRxiv : the preprint server for biology (2024)
Ashesh Ghosh, Andrew J Spakowitz
Local changes in protein filament properties drive large-scale membrane transformations involved in endosome tethering and fusion. Soft matter (2024)
Joseph G Wakim, Andrew J Spakowitz
Physical modeling of nucleosome clustering in euchromatin resulting from interactions between epigenetic reader proteins. Proceedings of the National Academy of Sciences of the United States of America 121 (26) (2024)
Ashesh Ghosh, Andrew J Spakowitz
Active and thermal fluctuations in multi-scale polymer structure and dynamics. Soft matter 18 (35) (2022)
Trent A C Newman, Bruno Beltran, James M McGehee, Daniel Elnatan, Cori K Cahoon, Michael R Paddy, Daniel B Chu, Andrew J Spakowitz, Sean M Burgess
Diffusion and distal linkages govern interchromosomal dynamics during meiotic prophase. Proceedings of the National Academy of Sciences of the United States of America 119 (12) (2022)
Luke Balhorn, Quinn MacPherson, Karen C Bustillo, Christopher J Takacs, Andrew J Spakowitz, Alberto Salleo
Closing the loop between microstructure and charge transport in conjugated polymers by combining microscopy and simulation. Proceedings of the National Academy of Sciences of the United States of America 119 (46) (2022)
Pamela C Cai, Bo Su, Lei Zou, Matthew J Webber, Sarah C Heilshorn, Andrew J Spakowitz
Rheological Characterization and Theoretical Modeling Establish Molecular Design Rules for Tailored Dynamically Associating Polymers. ACS central science 8 (9) (2022)
Ashesh Ghosh, Quinn MacPherson, Zhen-Gang Wang, Andrew J Spakowitz
Semiflexible polymer solutions. II. Fluctuations and Frank elastic constants. The Journal of chemical physics 157 (15) (2022)
Pamela C Cai, Brad A Krajina, Michael J Kratochvil, Lei Zou, Audrey Zhu, Elizabeth B Burgener, Paul L Bollyky, Carlos Carlos Milla Milla, Matthew J Webber, Andrew J Spakowitz, Sarah C Heilshorn
Dynamic light scattering microrheology for soft and living materials. Soft matter 17 (7) (2021)
Brad A Krajina, Bauer L LeSavage, Julien George Roth, Audrey W Zhu, Pamela C Cai, Andrew J Spakowitz, Sarah C Heilshorn
Microrheology reveals simultaneous cell-mediated matrix stiffening and fluidization that underlie breast cancer invasion. Science advances 7 (8) (2021)
Andrew J Spakowitz
Polymer physics across scales: Modeling the multiscale behavior of functional soft materials and biological systems. The Journal of chemical physics 151 (23) (2020)
Giovanna Bucci, Andrew J Spakowitz
Systematic Approach toward Accurate and Efficient DNA Sequencing via Nanoconfinement. ACS macro letters 9 (8) (2020)
Sarah H Sandholtz, Quinn MacPherson, Andrew J Spakowitz
Physical modeling of the heritability and maintenance of epigenetic modifications. Proceedings of the National Academy of Sciences of the United States of America 117 (34) (2020)
Shifan Mao, Quinn MacPherson, Andrew J Spakowitz
Fluctuation Effects in Semiflexible Diblock Copolymers. ACS macro letters 7 (1) (2017)