Anne E Simon

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 15

Top Topics

Dendritic Cells

Top Venues

Nucleic acids research

Journal of virology

NAR genomics and bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Xiaobao Ying, Sayanta Bera, Jinyuan Liu, Roberto Toscano-Morales, Chanyong Jang, Stephen Yang, Jovia Ho, Anne E Simon
Umbravirus-like RNA viruses are capable of independent systemic plant infection in the absence of encoded movement proteins. PLoS biology 22 (4) (2024)
Xiaobao Ying, Sayanta Bera, Jinyuan Liu, Roberto Toscano-Morales, Chanyong Jang, Stephen Yang, Jovia Ho, Anne E Simon
Umbravirus-like RNA viruses are capable of independent systemic plant infection in the absence of encoded movement proteins. PLoS biology 22 (4) (2024)
Philip Z Johnson, Jason M Needham, Natalie K Lim, Anne E Simon
Direct nanopore RNA sequencing of umbra-like virus-infected plants reveals long non-coding RNAs, specific cleavage sites, D-RNAs, foldback RNAs, and temporal- and tissue-specific profiles. NAR genomics and bioinformatics 6 (3) (2024)
Xiaobao Ying, Sayanta Bera, Jinyuan Liu, Roberto Toscano-Morales, Chanyong Jang, Stephen Yang, Jovia Ho, Anne E Simon
Umbravirus-like RNA viruses are capable of independent systemic plant infection in the absence of encoded movement proteins. PLoS biology 22 (4) (2024)
Philip Z Johnson, Jason M Needham, Natalie K Lim, Anne E Simon
Direct nanopore RNA sequencing of umbra-like virus-infected plants reveals long non-coding RNAs, specific cleavage sites, D-RNAs, foldback RNAs, and temporal- and tissue-specific profiles. NAR genomics and bioinformatics 6 (3) (2024)
Philip Z Johnson, Anne E Simon
RNAcanvas: interactive drawing and exploration of nucleic acid structures. Nucleic acids research (2023)
Philip Z Johnson, Anne E Simon
RNAcanvas: interactive drawing and exploration of nucleic acid structures. Nucleic acids research (2023)
Philip Z Johnson, Anne E Simon
RNAcanvas: interactive drawing and exploration of nucleic acid structures. Nucleic acids research (2023)
Anna A Mikkelsen, Feng Gao, Elizabeth Carino, Sayanta Bera, Anne E Simon
-1 Programmed ribosomal frameshifting in Class 2 umbravirus-like RNAs uses multiple long-distance interactions to shift between active and inactive structures and destabilize the frameshift stimulating element. Nucleic acids research (2023)
Skyler Uhl, Chanyong Jang, Justin J Frere, Tristan X Jordan, Anne E Simon, Benjamin R tenOever
ADAR1 Biology Can Hinder Effective Antiviral RNA Interference. Journal of virology (2023)
Jingyuan Liu, Anne E Simon
Identification of Novel 5' and 3' Translation Enhancers in Umbravirus-Like Coat Protein-Deficient RNA Replicons. Journal of virology 96 (7) (2022)
Philip Z Johnson, Wojciech K Kasprzak, Bruce A Shapiro, Anne E Simon
Structural characterization of a new subclass of panicum mosaic virus-like 3' cap-independent translation enhancer. Nucleic acids research 50 (3) (2022)
Muhammad Ilyas, Zhiyou Du, Anne E Simon
Opium Poppy Mosaic Virus Has an Xrn-Resistant, Translated Subgenomic RNA and a BTE 3' CITE. Journal of virology 95 (9) (2021)
Jared P May, Xuefeng Yuan, Erika Sawicki, Anne E Simon
RNA virus evasion of nonsense-mediated decay. PLoS pathogens 14 (11) (2018)
My-Tra Le, Wojciech K Kasprzak, Taejin Kim, Feng Gao, Megan Yl Young, Xuefeng Yuan, Bruce A Shapiro, Joonil Seog, Anne E Simon
Folding behavior of a T-shaped, ribosome-binding translation enhancer implicated in a wide-spread conformational switch. eLife 6 (2017)