Berkin Bilgic

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 80

Top Topics

Magnetic Resonance

Clinical Evaluation

Diffusion Weighted Imaging

Machine Learning

Top Venues

Magnetic resonance in medicine

AJNR. American journal of neuroradiology

Bioengineering (Basel, Switzerland)

medRxiv : the preprint server for health sciences

This page only lists publications with an associated author ORCID identifier.

Publications

Shohei Fujita, Borjan A Gagoski, Ken-Pin Hwang, Akifumi Hagiwara, Marcel Warntjes, Issei Fukunaga, Wataru Uchida, Yuya Saito, Towa Sekine, Rina Tachibana, Tomoya Muroi, Toshiya Akatsu, Akihiro Kasahara, Ryo Sato, Tsuyoshi Ueyama, Christina Andica, Koji Kamagata, Shiori Amemiya, Hidemasa Takao, Yasunobu Hoshino, Yuji Tomizawa, Kazumasa Yokoyama, Berkin Bilgic, Nobutaka Hattori, Osamu Abe, Shigeki Aoki
Cross-vendor multiparametric mapping of the human brain using 3D-QALAS: A multicenter and multivendor study. Magnetic resonance in medicine 91 (5) (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine 91 (6) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine 91 (6) (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine 92 (1) (2024)
Shohei Fujita, Borjan A Gagoski, Ken-Pin Hwang, Akifumi Hagiwara, Marcel Warntjes, Issei Fukunaga, Wataru Uchida, Yuya Saito, Towa Sekine, Rina Tachibana, Tomoya Muroi, Toshiya Akatsu, Akihiro Kasahara, Ryo Sato, Tsuyoshi Ueyama, Christina Andica, Koji Kamagata, Shiori Amemiya, Hidemasa Takao, Yasunobu Hoshino, Yuji Tomizawa, Kazumasa Yokoyama, Berkin Bilgic, Nobutaka Hattori, Osamu Abe, Shigeki Aoki
Cross-vendor multiparametric mapping of the human brain using 3D-QALAS: A multicenter and multivendor study. Magnetic resonance in medicine 91 (5) (2024)
Min Lang, Bryan Clifford, Wei-Ching Lo, Brooks P Applewhite, Azadeh Tabari, Augusto Lio M Goncalves Filho, Zahra Hosseini, Maria Gabriela Figueiro Longo, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Thorsten Feiweier, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, John Conklin
Clinical Evaluation of a 2-Minute Ultrafast Brain MR Protocol for Evaluation of Acute Pathology in the Emergency and Inpatient Settings. AJNR. American journal of neuroradiology (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine 92 (1) (2024)
Min Lang, Bryan Clifford, Wei-Ching Lo, Brooks P Applewhite, Azadeh Tabari, Augusto Lio M Goncalves Filho, Zahra Hosseini, Maria Gabriela Figueiro Longo, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Thorsten Feiweier, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, John Conklin
Clinical Evaluation of a 2-Minute Ultrafast Brain MR Protocol for Evaluation of Acute Pathology in the Emergency and Inpatient Settings. AJNR. American journal of neuroradiology 45 (4) (2024)
Qiang Liu, Borjan A Gagoski, Imam Ahmed Shaik, Carl-Fredrik Westin, Elisabeth A Wilde, Walter Schneider, Berkin Bilgic, William A Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi, Lipeng Ning
Time-division multiplexing (TDM) sequence removes bias in T 2 estimation and relaxation-diffusion measurements. Magnetic resonance in medicine (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine 92 (1) (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine 91 (6) (2024)
Shohei Fujita, Borjan A Gagoski, Ken-Pin Hwang, Akifumi Hagiwara, Marcel Warntjes, Issei Fukunaga, Wataru Uchida, Yuya Saito, Towa Sekine, Rina Tachibana, Tomoya Muroi, Toshiya Akatsu, Akihiro Kasahara, Ryo Sato, Tsuyoshi Ueyama, Christina Andica, Koji Kamagata, Shiori Amemiya, Hidemasa Takao, Yasunobu Hoshino, Yuji Tomizawa, Kazumasa Yokoyama, Berkin Bilgic, Nobutaka Hattori, Osamu Abe, Shigeki Aoki
Cross-vendor multiparametric mapping of the human brain using 3D-QALAS: A multicenter and multivendor study. Magnetic resonance in medicine (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine 91 (6) (2024)
Shohei Fujita, Borjan A Gagoski, Ken-Pin Hwang, Akifumi Hagiwara, Marcel Warntjes, Issei Fukunaga, Wataru Uchida, Yuya Saito, Towa Sekine, Rina Tachibana, Tomoya Muroi, Toshiya Akatsu, Akihiro Kasahara, Ryo Sato, Tsuyoshi Ueyama, Christina Andica, Koji Kamagata, Shiori Amemiya, Hidemasa Takao, Yasunobu Hoshino, Yuji Tomizawa, Kazumasa Yokoyama, Berkin Bilgic, Nobutaka Hattori, Osamu Abe, Shigeki Aoki
Cross-vendor multiparametric mapping of the human brain using 3D-QALAS: A multicenter and multivendor study. Magnetic resonance in medicine (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
null null, Berkin Bilgic, Mauro Costagli, Christoffer Laustsen, Jeff Duyn, Christian Langkammer, Jongho Lee, Xu Li, Chunlei Liu, José P Marques, Carlos Milovic, Simon Daniel Robinson, Ferdinand Schweser, Karin Shmueli, Pascal Spincemaille, Sina Straub, Peter van Zijl, Yi Wang, null null
Recommended implementation of quantitative susceptibility mapping for clinical research in the brain: A consensus of the ISMRM electro-magnetic tissue properties study group. Magnetic resonance in medicine 91 (5) (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine 91 (6) (2024)
null null, Berkin Bilgic, Mauro Costagli, Christoffer Laustsen, Jeff Duyn, Christian Langkammer, Jongho Lee, Xu Li, Chunlei Liu, José P Marques, Carlos Milovic, Simon Daniel Robinson, Ferdinand Schweser, Karin Shmueli, Pascal Spincemaille, Sina Straub, Peter van Zijl, Yi Wang, null null
Recommended implementation of quantitative susceptibility mapping for clinical research in the brain: A consensus of the ISMRM electro-magnetic tissue properties study group. Magnetic resonance in medicine 91 (5) (2024)
Min Lang, Bryan Clifford, Wei-Ching Lo, Brooks P Applewhite, Azadeh Tabari, Augusto Lio M Goncalves Filho, Zahra Hosseini, Maria Gabriela Figueiro Longo, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Thorsten Feiweier, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, John Conklin
Clinical Evaluation of a 2-Minute Ultrafast Brain MR Protocol for Evaluation of Acute Pathology in the Emergency and Inpatient Settings. AJNR. American journal of neuroradiology 45 (4) (2024)
null null, Berkin Bilgic, Mauro Costagli, Christoffer Laustsen, Jeff Duyn, Christian Langkammer, Jongho Lee, Xu Li, Chunlei Liu, José P Marques, Carlos Milovic, Simon Daniel Robinson, Ferdinand Schweser, Karin Shmueli, Pascal Spincemaille, Sina Straub, Peter van Zijl, Yi Wang, null null
Recommended implementation of quantitative susceptibility mapping for clinical research in the brain: A consensus of the ISMRM electro-magnetic tissue properties study group. Magnetic resonance in medicine 91 (5) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
Min Lang, Bryan Clifford, Wei-Ching Lo, Brooks P Applewhite, Azadeh Tabari, Augusto Lio M Goncalves Filho, Zahra Hosseini, Maria Gabriela Figueiro Longo, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Thorsten Feiweier, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, John Conklin
Clinical Evaluation of a 2-Minute Ultrafast Brain MR Protocol for Evaluation of Acute Pathology in the Emergency and Inpatient Settings. AJNR. American journal of neuroradiology 45 (4) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine 91 (6) (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine 91 (6) (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine 91 (6) (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine 92 (1) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine 91 (6) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine 91 (6) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
Qiang Liu, Borjan A Gagoski, Imam Ahmed Shaik, Carl-Fredrik Westin, Elisabeth A Wilde, Walter Schneider, Berkin Bilgic, William A Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi, Lipeng Ning
Time-division multiplexing (TDM) sequence removes bias in T 2 estimation and relaxation-diffusion measurements. Magnetic resonance in medicine (2024)
Qiang Liu, Lipeng Ning, Imam Ahmed Shaik, Congyu Liao, Borjan A Gagoski, Berkin Bilgic, William Grissom, Jon-Fredrik Nielsen, Maxim Zaitsev, Yogesh Rathi
Reduced cross-scanner variability using vendor-agnostic sequences for single-shell diffusion MRI. Magnetic resonance in medicine (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
null null, Berkin Bilgic, Mauro Costagli, Christoffer Laustsen, Jeff Duyn, Christian Langkammer, Jongho Lee, Xu Li, Chunlei Liu, José P Marques, Carlos Milovic, Simon Daniel Robinson, Ferdinand Schweser, Karin Shmueli, Pascal Spincemaille, Sina Straub, Peter van Zijl, Yi Wang, null null
Recommended implementation of quantitative susceptibility mapping for clinical research in the brain: A consensus of the ISMRM electro-magnetic tissue properties study group. Magnetic resonance in medicine (2024)
Min Lang, Bryan Clifford, Wei-Ching Lo, Brooks P Applewhite, Azadeh Tabari, Augusto Lio M Goncalves Filho, Zahra Hosseini, Maria Gabriela Figueiro Longo, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Thorsten Feiweier, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, John Conklin
Clinical Evaluation of a 2-Minute Ultrafast Brain MR Protocol for Evaluation of Acute Pathology in the Emergency and Inpatient Settings. AJNR. American journal of neuroradiology 45 (4) (2024)
Amir Heydari, Abbas Ahmadi, Tae Hyung Kim, Berkin Bilgic
Joint MAPLE: Accelerated joint T 1 and T 2 * $$ {{\mathrm{T}}_2}^{\ast } $$ mapping with scan-specific self-supervised networks. Magnetic resonance in medicine (2024)
Min Lang, Bryan Clifford, Wei-Ching Lo, Brooks P Applewhite, Azadeh Tabari, Augusto Lio M Goncalves Filho, Zahra Hosseini, Maria Gabriela Figueiro Longo, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Thorsten Feiweier, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, John Conklin
Clinical Evaluation of a 2-Minute Ultrafast Brain MR Protocol for Evaluation of Acute Pathology in the Emergency and Inpatient Settings. AJNR. American journal of neuroradiology 45 (4) (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2024)
Yohan Jun, Yamin Arefeen, Jaejin Cho, Shohei Fujita, Xiaoqing Wang, Patricia Ellen Grant, Borjan A Gagoski, Camilo Jaimes, Michael S Gee, Berkin Bilgic
Zero-DeepSub: Zero-shot deep subspace reconstruction for rapid multiparametric quantitative MRI using 3D-QALAS. Magnetic resonance in medicine 91 (6) (2024)
null null, Berkin Bilgic, Mauro Costagli, Christoffer Laustsen, Jeff Duyn, Christian Langkammer, Jongho Lee, Xu Li, Chunlei Liu, José P Marques, Carlos Milovic, Simon Daniel Robinson, Ferdinand Schweser, Karin Shmueli, Pascal Spincemaille, Sina Straub, Peter van Zijl, Yi Wang, null null
Recommended implementation of quantitative susceptibility mapping for clinical research in the brain: A consensus of the ISMRM electro-magnetic tissue properties study group. Magnetic resonance in medicine (2024)
Yamin Arefeen, Junshen Xu, Molin Zhang, Zijing Dong, Fuyixue Wang, Jacob White, Berkin Bilgic, Elfar Adalsteinsson
Latent signal models: Learning compact representations of signal evolution for improved time-resolved, multi-contrast MRI. Magnetic resonance in medicine (2023)
Zhifeng Chen, Congyu Liao, Xiaozhi Cao, Benedikt A Poser, Zhongbiao Xu, Wei-Ching Lo, Manyi Wen, Jaejin Cho, Qiyuan Tian, Yaohui Wang, Yanqiu Feng, Ling Xia, Wufan Chen, Feng Liu, Berkin Bilgic
3D-EPI blip-up/down acquisition (BUDA) with CAIPI and joint Hankel structured low-rank reconstruction for rapid distortion-free high-resolution T 2 * mapping. Magnetic resonance in medicine (2023)
Bernhard Gruber, Jason P Stockmann, Azma Mareyam, Boris Keil, Berkin Bilgic, Yulin Chang, Ehsan Kazemivalipour, Alexander J S Beckett, An T Vu, David A Feinberg, Lawrence Leroy Wald
A 128-channel receive array for cortical brain imaging at 7 T. Magnetic resonance in medicine (2023)
Zhifeng Chen, Congyu Liao, Xiaozhi Cao, Benedikt A Poser, Zhongbiao Xu, Wei-Ching Lo, Manyi Wen, Jaejin Cho, Qiyuan Tian, Yaohui Wang, Yanqiu Feng, Ling Xia, Wufan Chen, Feng Liu, Berkin Bilgic
3D-EPI blip-up/down acquisition (BUDA) with CAIPI and joint Hankel structured low-rank reconstruction for rapid distortion-free high-resolution T 2 * mapping. Magnetic resonance in medicine 89 (5) (2023)
Jaejin Cho, Borjan A Gagoski, Tae Hyung Kim, Fuyixue Wang, Mary Kate Manhard, Douglas C Dean, Steven R Kecskemeti, Arvind Caprihan, Wei-Ching Lo, Daniel Nico Splitthoff, Wei Liu, Daniel Polak, Stephen Cauley, Kawin Setsompop, Patricia Ellen Grant, Berkin Bilgic
Time-efficient, high-resolution 3T whole-brain relaxometry using 3D-QALAS with wave-CAIPI readouts. Magnetic resonance in medicine (2023)
Zhifeng Chen, Congyu Liao, Xiaozhi Cao, Benedikt A Poser, Zhongbiao Xu, Wei-Ching Lo, Manyi Wen, Jaejin Cho, Qiyuan Tian, Yaohui Wang, Yanqiu Feng, Ling Xia, Wufan Chen, Feng Liu, Berkin Bilgic
3D-EPI blip-up/down acquisition (BUDA) with CAIPI and joint Hankel structured low-rank reconstruction for rapid distortion-free high-resolution T 2 * mapping. Magnetic resonance in medicine 89 (5) (2023)
Yamin Arefeen, Junshen Xu, Molin Zhang, Zijing Dong, Fuyixue Wang, Jacob White, Berkin Bilgic, Elfar Adalsteinsson
Latent signal models: Learning compact representations of signal evolution for improved time-resolved, multi-contrast MRI. Magnetic resonance in medicine (2023)
Gabriel Ramos-Llorden, Daniel J Park, John E Kirsch, Alina Scholz, Boris Keil, Chiara Maffei, Hong-Hsi Lee, Berkin Bilgic, Brian L Edlow, Choukri Mekkaoui, Anastasia Yendiki, Thomas Witzel, Susie Y Huang
Eddy current-induced artifact correction in high b-value ex vivo human brain diffusion MRI with dynamic field monitoring. Magnetic resonance in medicine (2023)
Ahmad Seif Kanaan, Dongmei Yu, Riccardo Metere, Andreas Schäfer, Torsten Schlumm, Berkin Bilgic, Alfred Anwander, Carol A Mathews, Jeremiah M Scharf, Kirsten R Muller-Vahl, Harald E Möller
Convergent imaging-transcriptomic evidence for disturbed iron homeostasis in Gilles de la Tourette syndrome. medRxiv : the preprint server for health sciences (2023)
Yohan Jun, Jaejin Cho, Xiaoqing Wang, Michael S Gee, Patricia Ellen Grant, Berkin Bilgic, Borjan A Gagoski
SSL-QALAS: Self-Supervised Learning for rapid multiparameter estimation in quantitative MRI using 3D-QALAS. Magnetic resonance in medicine (2023)
Zhifeng Chen, Congyu Liao, Xiaozhi Cao, Benedikt A Poser, Zhongbiao Xu, Wei-Ching Lo, Manyi Wen, Jaejin Cho, Qiyuan Tian, Yaohui Wang, Yanqiu Feng, Ling Xia, Wufan Chen, Feng Liu, Berkin Bilgic
3D-EPI blip-up/down acquisition (BUDA) with CAIPI and joint Hankel structured low-rank reconstruction for rapid distortion-free high-resolution T 2 * mapping. Magnetic resonance in medicine 89 (5) (2023)
Yamin Arefeen, Junshen Xu, Molin Zhang, Zijing Dong, Fuyixue Wang, Jacob White, Berkin Bilgic, Elfar Adalsteinsson
Latent signal models: Learning compact representations of signal evolution for improved time-resolved, multi-contrast MRI. Magnetic resonance in medicine (2023)
Yamin Arefeen, Junshen Xu, Molin Zhang, Zijing Dong, Fuyixue Wang, Jacob White, Berkin Bilgic, Elfar Adalsteinsson
Latent signal models: Learning compact representations of signal evolution for improved time-resolved, multi-contrast MRI. Magnetic resonance in medicine (2023)
Zijing Zhang, Jaejin Cho, Long Wang, Congyu Liao, Hyeong-Geol Shin, Xiaozhi Cao, Jongho Lee, Jinmin Xu, Tao Zhang, Huihui Ye, Kawin Setsompop, Huafeng Liu, Berkin Bilgic
Blip up-down acquisition for spin- and gradient-echo imaging (BUDA-SAGE) with self-supervised denoising enables efficient T 2 , T 2 *, para- and dia-magnetic susceptibility mapping. Magnetic resonance in medicine 88 (2) (2022)
Fang Frank Yu, Susie Yi Huang, Ashwin Kumar, Thomas Witzel, Congyu Liao, Tanguy Duval, Julien Cohen-Adad, Berkin Bilgic
Erratum to: Rapid simultaneous acquisition of macromolecular tissue volume, susceptibility, and relaxometry maps (Magn Reson Med. 2022;87:781-790.). Magnetic resonance in medicine 87 (6) (2022)
Seohee So, Hyun Wook Park, Byungjai Kim, Francisco J Fritz, Benedikt A Poser, Alard Roebroeck, Berkin Bilgic
BUDA-MESMERISE: Rapid acquisition and unsupervised parameter estimation for T 1 , T 2 , M 0 , B 0 , and B 1 maps. Magnetic resonance in medicine 88 (1) (2022)
Jaejin Cho, Borjan A Gagoski, Tae Hyung Kim, Qiyuan Tian, Robert Frost, Itthi Chatnuntawech, Berkin Bilgic
Wave-Encoded Model-Based Deep Learning for Highly Accelerated Imaging with Joint Reconstruction. Bioengineering (Basel, Switzerland) 9 (12) (2022)
Serdest Demir, Bryan Clifford, Wei-Ching Lo, Azadeh Tabari, Augusto Lio M Goncalves Filho, Min Lang, Stephen F Cauley, Kawin Setsompop, Berkin Bilgic, Michael H Lev, Pamela W Schaefer, Otto Rapalino, Susie Y Huang, Tom Hilbert, Thorsten Feiweier, John Conklin
Optimization of magnetization transfer contrast for EPI FLAIR brain imaging. Magnetic resonance in medicine 87 (5) (2022)
Jaejin Cho, Congyu Liao, Qiyuan Tian, Zijing Zhang, Jinmin Xu, Wei-Ching Lo, Benedikt A Poser, V Andrew Stenger, Jason P Stockmann, Kawin Setsompop, Berkin Bilgic
Highly accelerated EPI with wave encoding and multi-shot simultaneous multislice imaging. Magnetic resonance in medicine 88 (3) (2022)
Jaejin Cho, Borjan A Gagoski, Tae Hyung Kim, Qiyuan Tian, Robert Frost, Itthi Chatnuntawech, Berkin Bilgic
Wave-Encoded Model-Based Deep Learning for Highly Accelerated Imaging with Joint Reconstruction. Bioengineering (Basel, Switzerland) 9 (12) (2022)
Xiaozhi Cao, Congyu Liao, Siddharth Srinivasan Iyer, Zhixing Wang, Zihan Zhou, Erpeng Dai, Gilad Liberman, Zijing Dong, Ting Gong, Hongjian He, Jianhui Zhong, Berkin Bilgic, Kawin Setsompop
Optimized multi-axis spiral projection MR fingerprinting with subspace reconstruction for rapid whole-brain high-isotropic-resolution quantitative imaging. Magnetic resonance in medicine 88 (1) (2022)
José P Marques, Jakob Meineke, Carlos Milovic, Berkin Bilgic, Christoffer Laustsen, Renaud Hédouin, Wietske van der Zwaag, Christian Langkammer, Ferdinand Schweser
QSM reconstruction challenge 2.0: A realistic in silico head phantom for MRI data simulation and evaluation of susceptibility mapping procedures. Magnetic resonance in medicine 86 (1) (2021)
null null, Berkin Bilgic, Christian Langkammer, José P Marques, Jakob Meineke, Carlos Milovic, Ferdinand Schweser
QSM reconstruction challenge 2.0: Design and report of results. Magnetic resonance in medicine 86 (3) (2021)
Mary Kate Manhard, Jason P Stockmann, Congyu Liao, Daniel Park, SoHyun Han, Merlin J Fair, Maaike van den Boomen, Jon Polimeni, Berkin Bilgic, Kawin Setsompop
A multi-inversion multi-echo spin and gradient echo echo planar imaging sequence with low image distortion for rapid quantitative parameter mapping and synthetic image contrasts. Magnetic resonance in medicine 86 (2) (2021)
Bryan Clifford, John Conklin, Susie Y Huang, Thorsten Feiweier, Zahra Hosseini, Augusto Lio M Goncalves Filho, Azadeh Tabari, Serdest Demir, Wei-Ching Lo, Maria Gabriela Figueiro Longo, Michael Lev, Pam Schaefer, Otto Rapalino, Kawin Setsompop, Berkin Bilgic, Stephen Cauley
An artificial intelligence-accelerated 2-minute multi-shot echo planar imaging protocol for comprehensive high-quality clinical brain imaging. Magnetic resonance in medicine 87 (5) (2021)
Yamin Arefeen, Onur Beker, Jaejin Cho, Heng Yu, Elfar Adalsteinsson, Berkin Bilgic
Scan-specific artifact reduction in k-space (SPARK) neural networks synergize with physics-based reconstruction to accelerate MRI. Magnetic resonance in medicine 87 (2) (2021)
Congyu Liao, Berkin Bilgic, Qiyuan Tian, Jason P Stockmann, Xiaozhi Cao, Qiuyun Fan, Siddharth Srinivasan Iyer, Fuyixue Wang, Chanon Ngamsombat, Wei-Ching Lo, Mary Kate Manhard, Susie Y Huang, Lawrence L Wald, Kawin Setsompop
Distortion-free, high-isotropic-resolution diffusion MRI with gSlider BUDA-EPI and multicoil dynamic B0 shimming. Magnetic resonance in medicine 86 (2) (2021)
Fang Frank Yu, Susie Yi Huang, Ashwin Kumar, Thomas Witzel, Congyu Liao, Tanguy Duval, Julien Cohen-Adad, Berkin Bilgic
Rapid simultaneous acquisition of macromolecular tissue volume, susceptibility, and relaxometry maps. Magnetic resonance in medicine 87 (2) (2021)
Xiaozhi Cao, Kang Wang, Congyu Liao, Zijing Zhang, Siddharth Srinivasan Iyer, Zhifeng Chen, Wei-Ching Lo, Huafeng Liu, Hongjian He, Kawin Setsompop, Jianhui Zhong, Berkin Bilgic
Efficient T2 mapping with blip-up/down EPI and gSlider-SMS (T2 -BUDA-gSlider). Magnetic resonance in medicine 86 (4) (2021)
Carlos Milovic, Claudia Prieto, Berkin Bilgic, Sergio Uribe, Julio Acosta-Cabronero, Pablo Irarrazaval, Cristian Tejos
Comparison of parameter optimization methods for quantitative susceptibility mapping. Magnetic resonance in medicine 85 (1) (2020)
Zijing Dong, Fuyixue Wang, Timothy G Reese, Berkin Bilgic, Kawin Setsompop
Echo planar time-resolved imaging with subspace reconstruction and optimized spatiotemporal encoding. Magnetic resonance in medicine 84 (5) (2020)
SoHyun Han, Congyu Liao, Mary Kate Manhard, Daniel Joseph Park, Berkin Bilgic, Merlin J Fair, Fuyixue Wang, Anna I Blazejewska, William A Grissom, Jonathan R Polimeni, Kawin Setsompop
Accelerated spin-echo functional MRI using multisection excitation by simultaneous spin-echo interleaving (MESSI) with complex-encoded generalized slice dithered enhanced resolution (cgSlider) simultaneous multislice echo-planar imaging. Magnetic resonance in medicine 84 (1) (2019)
Congyu Liao, Jason Stockmann, Qiyuan Tian, Berkin Bilgic, Nicolas S Arango, Mary Kate Manhard, Susie Y Huang, William A Grissom, Lawrence L Wald, Kawin Setsompop
High-fidelity, high-isotropic-resolution diffusion imaging through gSlider acquisition with B 1 + and T1 corrections and integrated ΔB0 /Rx shim array. Magnetic resonance in medicine 83 (1) (2019)
Berkin Bilgic, Itthi Chatnuntawech, Mary Kate Manhard, Qiyuan Tian, Congyu Liao, Siddharth Srinivasan Iyer, Stephen F Cauley, Susie Y Huang, Jonathan R Polimeni, Lawrence L Wald, Kawin Setsompop
Highly accelerated multishot echo planar imaging through synergistic machine learning and joint reconstruction. Magnetic resonance in medicine 82 (4) (2019)