Chaolin Zhang

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 22

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Nature communications

bioRxiv : the preprint server for biology

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Chencheng Xu, Suying Bao, Hao Chen, Tao Jiang, Chaolin Zhang
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences. bioRxiv : the preprint server for biology (2024)
Yocelyn Recinos, Dmytro Ustianenko, Yow-Tyng Yeh, Xiaojian Wang, Martin Jacko, Lekha V Yesantharao, Qiyang Wu, Chaolin Zhang
CRISPR-dCas13d-based deep screening of proximal and distal splicing-regulatory elements. Nature communications 15 (1) (2024)
Miquel Anglada-Girotto, Daniel F Moakley, Chaolin Zhang, Samuel Miravet-Verde, Andrea Califano, Luis Serrano
Disentangling the splicing factor programs underlying complex molecular phenotypes. bioRxiv : the preprint server for biology (2024)
Chencheng Xu, Suying Bao, Hao Chen, Tao Jiang, Chaolin Zhang
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences. bioRxiv : the preprint server for biology (2024)
Huijuan Feng, Xiang-Jun Lu, Suvrajit Maji, Linxi Liu, Dmytro Ustianenko, Noam D Rudnick, Chaolin Zhang
Structure-based prediction and characterization of photo-crosslinking in native protein-RNA complexes. Nature communications 15 (1) (2024)
Chencheng Xu, Suying Bao, Hao Chen, Tao Jiang, Chaolin Zhang
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences. bioRxiv : the preprint server for biology (2024)
Huijuan Feng, Xiang-Jun Lu, Suvrajit Maji, Linxi Liu, Dmytro Ustianenko, Noam D Rudnick, Chaolin Zhang
Structure-based prediction and characterization of photo-crosslinking in native protein-RNA complexes. Nature communications 15 (1) (2024)
Yocelyn Recinos, Dmytro Ustianenko, Yow-Tyng Yeh, Xiaojian Wang, Martin Jacko, Lekha V Yesantharao, Qiyang Wu, Chaolin Zhang
CRISPR-dCas13d-based deep screening of proximal and distal splicing-regulatory elements. Nature communications 15 (1) (2024)
Yocelyn Recinos, Dmytro Ustianenko, Yow-Tyng Yeh, Xiaojian Wang, Martin Jacko, Lekha V Yesantharao, Qiyang Wu, Chaolin Zhang
CRISPR-dCas13d-based deep screening of proximal and distal splicing-regulatory elements. Nature communications 15 (1) (2024)
Huijuan Feng, Xiang-Jun Lu, Suvrajit Maji, Linxi Liu, Dmytro Ustianenko, Noam D Rudnick, Chaolin Zhang
Structure-based prediction and characterization of photo-crosslinking in native protein-RNA complexes. Nature communications 15 (1) (2024)
Chencheng Xu, Suying Bao, Hao Chen, Tao Jiang, Chaolin Zhang
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences. bioRxiv : the preprint server for biology (2024)
Chencheng Xu, Suying Bao, Hao Chen, Tao Jiang, Chaolin Zhang
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences. bioRxiv : the preprint server for biology (2024)
Chencheng Xu, Suying Bao, Hao Chen, Tao Jiang, Chaolin Zhang
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences. bioRxiv : the preprint server for biology (2024)
Miquel Anglada-Girotto, Daniel F Moakley, Chaolin Zhang, Samuel Miravet-Verde, Andrea Califano, Luis Serrano
Disentangling the splicing factor programs underlying complex molecular phenotypes. bioRxiv : the preprint server for biology (2024)
Yocelyn Recinos, Dmytro Ustianenko, Yow-Tyng Yeh, Xiaojian Wang, Martin Jacko, Lekha V Yesantharao, Qiyang Wu, Chaolin Zhang
CRISPR-dCas13d-based deep screening of proximal and distal splicing-regulatory elements. Nature communications 15 (1) (2024)
Huijuan Feng, Xiang-Jun Lu, Suvrajit Maji, Linxi Liu, Dmytro Ustianenko, Noam D Rudnick, Chaolin Zhang
Structure-based prediction and characterization of photo-crosslinking in native protein-RNA complexes. Nature communications 15 (1) (2024)
Yocelyn Recinos, Dmytro Ustianenko, Yow-Tyng Yeh, Xiaojian Wang, Martin Jacko, Lekha V Yesantharao, Qiyang Wu, Chaolin Zhang
Deep screening of proximal and distal splicing-regulatory elements in a native sequence context. bioRxiv : the preprint server for biology (2023)
Huijuan Feng, Daniel F Moakley, Shuonan Chen, Melissa G McKenzie, Vilas Menon, Chaolin Zhang
Complexity and graded regulation of neuronal cell-type-specific alternative splicing revealed by single-cell RNA sequencing. Proceedings of the National Academy of Sciences of the United States of America 118 (10) (2021)
Matthieu Genestine, Daisy Ambriz, Gregg W Crabtree, Patrick Dummer, Anna Molotkova, Michael Quintero, Angeliki Mela, Saptarshi Biswas, Huijuan Feng, Chaolin Zhang, Peter Canoll, Gunnar Hargus, Dritan Agalliu, Joseph A Gogos, Edmund Au
Vascular-derived SPARC and SerpinE1 regulate interneuron tangential migration and accelerate functional maturation of human stem cell-derived interneurons. eLife 10 (2021)
Shinichiro Oku, Huijuan Feng, Steven Connor, Andrea Toledo, Peng Zhang, Yue Zhang, Olivier Thoumine, Chaolin Zhang, Ann Marie Craig
Alternative splicing at neuroligin site A regulates glycan interaction and synaptogenic activity. eLife 9 (2020)
Sebastien M Weyn-Vanhentenryck, Huijuan Feng, Dmytro Ustianenko, Rachel Duffié, Qinghong Yan, Martin Jacko, Jose C Martinez, Marianne Goodwin, Xuegong Zhang, Ulrich Hengst, Stavros Lomvardas, Maurice S Swanson, Chaolin Zhang
Precise temporal regulation of alternative splicing during neural development. Nature communications 9 (1) (2018)
Huijuan Feng, Xuegong Zhang, Chaolin Zhang
mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data. Nature communications 6 (2015)