Chien-Chi Lo

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 11

Top Topics

Respiratory Syndrome Coronavirus

Candida Albicans

Top Venues

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Ryan Connor, Migun Shakya, David A Yarmosh, Wolfgang Maier, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Lisa A Purcell, Kim D Pruitt
Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. Viruses 16 (3) (2024)
Michelle Qiu Carter, Beatriz Quiñones, Xiaohua He, Antares Pham, Diana Carychao, Michael B Cooley, Chien-Chi Lo, Patrick S G Chain, Rebecca L Lindsey, James L Bono
Genomic and Phenotypic Characterization of Shiga Toxin-Producing Escherichia albertii Strains Isolated from Wild Birds in a Major Agricultural Region in California. Microorganisms 11 (11) (2023)
Ryan Connor, David A Yarmosh, Wolfgang Maier, Migun Shakya, Ross Martin, Rebecca Bradford, J Rodney Brister, Patrick S G Chain, Courtney A Copeland, Julia di Iulio, Bin Hu, Philip J Ebert, Jonathan Gunti, Yumi Jin, Kenneth S Katz, Andrey Kochergin, Tré LaRosa, Jiani Li, Po-E Li, Chien-Chi Lo, Sujatha Rashid, Evguenia S Maiorova, Chunlin Xiao, Vadim Zalunin, Kim D Pruitt
Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance. bioRxiv : the preprint server for biology (2022)
Chien-Chi Lo, Migun Shakya, Ryan Connor, Karen Davenport, Mark Flynn, Adán Myers Y Gutiérrez, Bin Hu, Po-E Li, Elais Player Jackson, Yan Xu, Patrick S G Chain
EDGE COVID-19: a web platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts. Bioinformatics (Oxford, England) 38 (10) (2022)
Alison E Murray, Chien-Chi Lo, Hajnalka E Daligault, Nicole E Avalon, Robert W Read, Karen W Davenport, Mary L Higham, Yuliya A Kunde, Armand E K Dichosa, Bill J Baker, Patrick S G Chain
Discovery of an Antarctic Ascidian-Associated Uncultivated Verrucomicrobia with Antimelanoma Palmerolide Biosynthetic Potential. mSphere (2021)