Chuanlin Shi

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 24

Top Topics

Genome Wide Association

Pulmonary Tuberculosis

Top Venues

National science review

The New phytologist

Journal of integrative plant biology

Plant biotechnology journal

This page only lists publications with an associated author ORCID identifier.

Publications

Yuchao Cui, Yarong Lin, Hua Wei, Yuehan Pan, Chuanfu An, Hongge Qian, Longbo Yang, Xinglan Cao, Zhipeng Zhang, Xiaosi Zeng, Tianyi Wang, Wenchuang He, Xiang Pei Liu, Chuanlin Shi, Qiaoling Yuan, Xiaoman Yu, Liang Chen, Feng Wang, Yiwang Zhu, Qian Qian, Lian-Guang Shang
Identification of salt tolerance-associated presence-absence variations in the OsMADS56 gene through the integration of DEGs dataset and eQTL analysis. The New phytologist 243 (3) (2024)
Chuanlin Shi, Wenli Zou, Xiangpei Liu, Hong Zhang, Xiaofang Li, Guiling Fu, Qili Fei, Qian Qian, Lian-Guang Shang
Programmable RNA N 6 -methyladenosine editing with CRISPR/dCas13a in plants. Plant biotechnology journal 22 (7) (2024)
Hua Wei, Xianmeng Wang, Zhipeng Zhang, Longbo Yang, Qianqian Zhang, Yilin Li, Huiying He, Dandan Chen, Bin Zhang, Chongke Zheng, Yue Leng, Xinglan Cao, Yan Cui, Chuanlin Shi, Yifan Liu, Yang Lv, Jie Ma, Wenchuang He, Xiang Pei Liu, Qiang Xu, Qiaoling Yuan, Xiaoman Yu, Tianyi Wang, Hongge Qian, Xiaoxia Li, Bintao Zhang, Hong Zhang, Wu Chen, Mingliang Guo, Xiaofan Dai, Yuexing Wang, Xiaoming Zheng, Longbiao Guo, Xianzhi Xie, Qian Qian, Lian-Guang Shang
Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice. National science review 11 (4) (2024)
Yuchao Cui, Yarong Lin, Hua Wei, Yuehan Pan, Chuanfu An, Hongge Qian, Longbo Yang, Xinglan Cao, Zhipeng Zhang, Xiaosi Zeng, Tianyi Wang, Wenchuang He, Xiang Pei Liu, Chuanlin Shi, Qiaoling Yuan, Xiaoman Yu, Liang Chen, Feng Wang, Yiwang Zhu, Qian Qian, Lian-Guang Shang
Identification of salt tolerance-associated presence-absence variations in the OsMADS56 gene through the integration of DEGs dataset and eQTL analysis. The New phytologist 243 (3) (2024)
Chuanlin Shi, Wenli Zou, Xiangpei Liu, Hong Zhang, Xiaofang Li, Guiling Fu, Qili Fei, Qian Qian, Lian-Guang Shang
Programmable RNA N 6 -methyladenosine editing with CRISPR/dCas13a in plants. Plant biotechnology journal 22 (7) (2024)
Hong Zhang, Wu Chen, De Zhu, Bintao Zhang, Qiang Xu, Chuanlin Shi, Huiying He, Xiaofan Dai, Yilin Li, Wenchuang He, Yang Lv, Longbo Yang, Xinglan Cao, Yan Cui, Detang Zou, Hua Wei, Xiang Pei Liu, Bin Zhang, Xianmeng Wang, Mingliang Guo, Zhipeng Zhang, Xiaoxia Li, Congcong Liu, Qiaoling Yuan, Tianyi Wang, Xiaoman Yu, Hongge Qian, Qianqian Zhang, Dandan Chen, Guanjing Hu, Qian Qian, Lian-Guang Shang
Population-level exploration of alternative splicing and its unique role in controlling agronomic traits of rice. The Plant cell (2024)
Yuchao Cui, Yarong Lin, Hua Wei, Yuehan Pan, Chuanfu An, Hongge Qian, Longbo Yang, Xinglan Cao, Zhipeng Zhang, Xiaosi Zeng, Tianyi Wang, Wenchuang He, Xiang Pei Liu, Chuanlin Shi, Qiaoling Yuan, Xiaoman Yu, Liang Chen, Feng Wang, Yiwang Zhu, Qian Qian, Lian-Guang Shang
Identification of salt tolerance-associated presence-absence variations in the OsMADS56 gene through the integration of DEGs dataset and eQTL analysis. The New phytologist (2024)
Xiaoxia Li, Xiaofan Dai, Huiying He, Yang Lv, Longbo Yang, Wenchuang He, Congcong Liu, Hua Wei, Xiang Pei Liu, Qiaoling Yuan, Xianmeng Wang, Tianyi Wang, Bintao Zhang, Hong Zhang, Wu Chen, Yue Leng, Xiaoman Yu, Hongge Qian, Bin Zhang, Mingliang Guo, Zhipeng Zhang, Chuanlin Shi, Qianqian Zhang, Yan Cui, Qiang Xu, Xinglan Cao, Dandan Chen, Yongfeng Zhou, Qian Qian, Lian-Guang Shang
A pan-TE map highlights transposable elements underlying domestication and agronomic traits in Asian rice. National science review 11 (6) (2024)
Huiying He, Yue Leng, Xinglan Cao, Yiwang Zhu, Xiaoxia Li, Qiaoling Yuan, Bin Zhang, Wenchuang He, Hua Wei, Xiangpei Liu, Qiang Xu, Mingliang Guo, Hong Zhang, Longbo Yang, Yang Lv, Xianmeng Wang, Chuanlin Shi, Zhipeng Zhang, Wu Chen, Bintao Zhang, Tianyi Wang, Xiaoman Yu, Hongge Qian, Qianqian Zhang, Xiaofan Dai, Congcong Liu, Yan Cui, Yuexing Wang, Xiaoming Zheng, Guosheng Xiong, Yongfeng Zhou, Qian Qian, Lian-Guang Shang
The pan-tandem repeat map highlights multiallelic variants underlying gene expression and agronomic traits in rice. Nature communications 15 (1) (2024)
Huiying He, Yue Leng, Xinglan Cao, Yiwang Zhu, Xiaoxia Li, Qiaoling Yuan, Bin Zhang, Wenchuang He, Hua Wei, Xiangpei Liu, Qiang Xu, Mingliang Guo, Hong Zhang, Longbo Yang, Yang Lv, Xianmeng Wang, Chuanlin Shi, Zhipeng Zhang, Wu Chen, Bintao Zhang, Tianyi Wang, Xiaoman Yu, Hongge Qian, Qianqian Zhang, Xiaofan Dai, Congcong Liu, Yan Cui, Yuexing Wang, Xiaoming Zheng, Guosheng Xiong, Yongfeng Zhou, Qian Qian, Lian-Guang Shang
The pan-tandem repeat map highlights multiallelic variants underlying gene expression and agronomic traits in rice. Nature communications 15 (1) (2024)
Xiaoxia Li, Xiaofan Dai, Huiying He, Yang Lv, Longbo Yang, Wenchuang He, Congcong Liu, Hua Wei, Xiang Pei Liu, Qiaoling Yuan, Xianmeng Wang, Tianyi Wang, Bintao Zhang, Hong Zhang, Wu Chen, Yue Leng, Xiaoman Yu, Hongge Qian, Bin Zhang, Mingliang Guo, Zhipeng Zhang, Chuanlin Shi, Qianqian Zhang, Yan Cui, Qiang Xu, Xinglan Cao, Dandan Chen, Yongfeng Zhou, Qian Qian, Lian-Guang Shang
A pan-TE map highlights transposable elements underlying domestication and agronomic traits in Asian rice. National science review 11 (6) (2024)
Yang Lv, Congcong Liu, Xiaoxia Li, Yueying Wang, Huiying He, Wenchuang He, Wu Chen, Longbo Yang, Xiaofan Dai, Xinglan Cao, Xiaoman Yu, Jiajia Liu, Qian Qian, Hua Wei, Hong Zhang, Hongge Qian, Chuanlin Shi, Detang Zou, Xiang Pei Liu, Mingliang Guo, Xianmeng Wang, Zhipeng Zhang, Tianyi Wang, Bintao Zhang, Qiang Xu, Yan Cui, Qianqian Zhang, Qiaoling Yuan, Noushin Jahan, Jie Ma, Xiaoming Zheng, Yongfeng Zhou, Qian Qian, Longbiao Guo, Lian-Guang Shang
A centromere map based on super pan-genome highlights the structure and function of rice centromeres. Journal of integrative plant biology 66 (2) (2024)
Hua Wei, Xianmeng Wang, Zhipeng Zhang, Longbo Yang, Qianqian Zhang, Yilin Li, Huiying He, Dandan Chen, Bin Zhang, Chongke Zheng, Yue Leng, Xinglan Cao, Yan Cui, Chuanlin Shi, Yifan Liu, Yang Lv, Jie Ma, Wenchuang He, Xiang Pei Liu, Qiang Xu, Qiaoling Yuan, Xiaoman Yu, Tianyi Wang, Hongge Qian, Xiaoxia Li, Bintao Zhang, Hong Zhang, Wu Chen, Mingliang Guo, Xiaofan Dai, Yuexing Wang, Xiaoming Zheng, Longbiao Guo, Xianzhi Xie, Qian Qian, Lian-Guang Shang
Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice. National science review 11 (4) (2024)
Chuanlin Shi, Shaohua Yang, Yan Cui, Zhan Xu, Bin Zhang, Mingliang Guo, Yiwang Zhu, Ying Yang, Feng Wang, Huaqing Liu, Yu Zhang, Qian Qian, Lian-Guang Shang
Oxidative burst causes loss of tapetal Ubisch body and male sterility in rice. The New phytologist (2024)
Hua Wei, Xianmeng Wang, Zhipeng Zhang, Longbo Yang, Qianqian Zhang, Yilin Li, Huiying He, Dandan Chen, Bin Zhang, Chongke Zheng, Yue Leng, Xinglan Cao, Yan Cui, Chuanlin Shi, Yifan Liu, Yang Lv, Jie Ma, Wenchuang He, Xiang Pei Liu, Qiang Xu, Qiaoling Yuan, Xiaoman Yu, Tianyi Wang, Hongge Qian, Xiaoxia Li, Bintao Zhang, Hong Zhang, Wu Chen, Mingliang Guo, Xiaofan Dai, Yuexing Wang, Xiaoming Zheng, Longbiao Guo, Xianzhi Xie, Qian Qian, Lian-Guang Shang
Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice. National science review 11 (4) (2024)
Chuanlin Shi, Wenli Zou, Xiangpei Liu, Hong Zhang, Xiaofang Li, Guiling Fu, Qili Fei, Qian Qian, Lian-Guang Shang
Programmable RNA N 6 -methyladenosine editing with CRISPR/dCas13a in plants. Plant biotechnology journal (2024)
Yang Lv, Congcong Liu, Xiaoxia Li, Yueying Wang, Huiying He, Wenchuang He, Wu Chen, Longbo Yang, Xiaofan Dai, Xinglan Cao, Xiaoman Yu, Jiajia Liu, Qian Qian, Hua Wei, Hong Zhang, Hongge Qian, Chuanlin Shi, Detang Zou, Xiang Pei Liu, Mingliang Guo, Xianmeng Wang, Zhipeng Zhang, Tianyi Wang, Bintao Zhang, Qiang Xu, Yan Cui, Qianqian Zhang, Qiaoling Yuan, Noushin Jahan, Jie Ma, Xiaoming Zheng, Yongfeng Zhou, Qian Qian, Longbiao Guo, Lian-Guang Shang
A centromere map based on super pan-genome highlights the structure and function of rice centromeres. Journal of integrative plant biology 66 (2) (2024)
Xiaofang Li, Yanping Wei, Qili Fei, Guilin Fu, Yu Gan, Chuanlin Shi
TurboID-mediated proximity labeling for screening interacting proteins of FIP37 in Arabidopsis . Plant direct 7 (12) (2023)
Xiaofang Li, Yanping Wei, Qili Fei, Guilin Fu, Yu Gan, Chuanlin Shi
TurboID-mediated proximity labeling for screening interacting proteins of FIP37 in Arabidopsis . Plant direct 7 (12) (2023)
Yarong Lin, Yiwang Zhu, Yuchao Cui, Hongge Qian, Qiaoling Yuan, Rui Chen, Yan Lin, Jianmin Chen, Xishi Zhou, Chuanlin Shi, Chuanfu An, Taijiao Hu, Chenbo Gu, Xiaoman Yu, Xiying Zhu, Yuexing Wang, Qian Qian, Cui-Jun Zhang, Feng Wang, Lian-Guang Shang
Identification of natural allelic variation in TTL1 controlling thermotolerance and grain size by a rice super pan-genome. Journal of integrative plant biology (2023)
Yang Lv, Congcong Liu, Xiaoxia Li, Yueying Wang, Huiying He, Wenchuang He, Wu Chen, Longbo Yang, Xiaofan Dai, Xinglan Cao, Xiaoman Yu, Jiajia Liu, Qian Qian, Hua Wei, Hong Zhang, Hongge Qian, Chuanlin Shi, Detang Zou, Xiang Pei Liu, Mingliang Guo, Xianmeng Wang, Zhipeng Zhang, Tianyi Wang, Bintao Zhang, Qiang Xu, Yan Cui, Qianqian Zhang, Qiaoling Yuan, Noushin Jahan, Jie Ma, Xiaoming Zheng, Yongfeng Zhou, Qian Qian, Longbiao Guo, Lian-Guang Shang
A centromere map based on super pan-genome highlights the structure and function of rice centromeres. Journal of integrative plant biology (2023)
Yang Lv, Congcong Liu, Xiaoxia Li, Yueying Wang, Chuanfu An, Wenchuang He, Wu Chen, Longbo Yang, Xiaofan Dai, Xinglan Cao, Xiaoman Yu, Jiajia Liu, Qian Qian, Hua Wei, Hong Zhang, Hongge Qian, Chuanlin Shi, Detang Zou, Xiang Pei Liu, Mingliang Guo, Xianmeng Wang, Zhipeng Zhang, Tianyi Wang, Bintao Zhang, Qiang Xu, Yan Cui, Qianqian Zhang, Qiaoling Yuan, Noushin Jahan, Jie Ma, Xiaoming Zheng, Yongfeng Zhou, Qian Qian, Longbiao Guo, Lian-Guang Shang
A centromere map based on super pan-genome highlights the structure and function of rice centromeres. Journal of integrative plant biology (2023)
Chuanlin Shi, Wenli Zou, Yiwang Zhu, Jie Zhang, Chong Teng, Hua Wei, Huiying He, Wenchuang He, Xiang Pei Liu, Qian Qian, Hong Zhang, Yue Leng, Mingliang Guo, Xianmeng Wang, Wu Chen, Zhipeng Zhang, Hongge Qian, Yan Cui, Hongshuang Jiang, Ying Chen, Qili Fei, Blake C Meyers, Wanqi Liang, Qian Qian, Lian-Guang Shang
mRNA cleavage by 21-nucleotide phasiRNAs determines temperature-sensitive male sterility in rice. Plant physiology (2023)
Chuanlin Shi, Jie Zhang, Bingjin Wu, Rachel Jouni, Changxiu Yu, Blake C Meyers, Wanqi Liang, Qili Fei
Temperature-sensitive male sterility in rice determined by the roles of AGO1d in reproductive phasiRNA biogenesis and function. The New phytologist 236 (4) (2022)