Chun-Xiao Song

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 13

Top Topics

Circulating Tumor

Single Molecule

Mass Spectrometry

Top Venues

Nature communications

Nature biotechnology

Wellcome open research

ACS chemical biology

This page only lists publications with an associated author ORCID identifier.

Publications

Haiqi Xu, Jinfeng Chen, Jingfei Cheng, Linzhen Kong, Xiufei Chen, Masato Inoue, Yibin Liu, Skirmantas Kriaucionis, Meiping Zhao, Chun-Xiao Song
Modular Oxidation of Cytosine Modifications and Their Application in Direct and Quantitative Sequencing of 5-Hydroxymethylcytosine. Journal of the American Chemical Society (2023)
Xiufei Chen, Haiqi Xu, Xiao Shu, Chun-Xiao Song
Mapping epigenetic modifications by sequencing technologies. Cell death and differentiation (2023)
Naoko Irie, Sun-Min Lee, Valentina Lorenzi, Haiqi Xu, Jinfeng Chen, Masato Inoue, Toshihiro Kobayashi, Carmen Sancho-Serra, Elena Drousioti, Sabine Dietmann, Roser Vento-Tormo, Chun-Xiao Song, M Azim Surani
DMRT1 regulates human germline commitment. Nature cell biology (2023)
Yibin Liu, Chun-Xiao Song
TAPS: The Development of a Direct and Base-Resolution Sequencing Method for DNA Methylation. ACS chemical biology 17 (10) (2022)
Paulina Siejka-Zielińska, Jingfei Cheng, Felix Jackson, Yibin Liu, Zahir Soonawalla, Srikanth Reddy, Michael Silva, Luminita Puta, Misti Vanette McCain, Emma L Culver, Noor Bekkali, Benjamin Schuster-Boeckler, Pier Francesco Palamara, Derek Mann, Helen L Reeves, Eleanor Barnes, Shivan Sivakumar, Chun-Xiao Song
Cell-free DNA TAPS provides multimodal information for early cancer detection. Science advances 7 (36) (2021)
Yibin Liu, Zhiyuan Hu, Jingfei Cheng, Paulina Siejka-Zielińska, Jinfeng Chen, Masato Inoue, Ahmed Ashour Ahmed, Chun-Xiao Song
Subtraction-free and bisulfite-free specific sequencing of 5-methylcytosine and its oxidized derivatives at base resolution. Nature communications 12 (1) (2021)
Yibin Liu, Jingfei Cheng, Paulina Siejka-Zielińska, Carika Weldon, Hannah Roberts, Maria Lopopolo, Andrea Magri, Valentina D'Arienzo, James M Harris, Jane A McKeating, Chun-Xiao Song
Accurate targeted long-read DNA methylation and hydroxymethylation sequencing with TAPS. Genome biology 21 (1) (2020)
Lin-Yong Zhao, Jinghui Song, Yibin Liu, Chun-Xiao Song, Chengqi Yi
Mapping the epigenetic modifications of DNA and RNA. Protein & cell 11 (11) (2020)
Fang Yuan, Ying Bi, Paulina Siejka-Zielinska, Ying-Lin Zhou, Xin-Xiang Zhang, Chun-Xiao Song
Bisulfite-free and base-resolution analysis of 5-methylcytidine and 5-hydroxymethylcytidine in RNA with peroxotungstate. Chemical communications (Cambridge, England) 55 (16) (2019)
Fang Yuan, Ying Bi, Jia-Yuan Zhang, Ying-Lin Zhou, Xin-Xiang Zhang, Chun-Xiao Song
5-Carboxylcytosine is resistant towards phosphodiesterase I digestion: implications for epigenetic modification quantification by mass spectrometry. RSC advances 9 (50) (2019)
Tatyana B Nesterova, Guifeng Wei, Heather Coker, Greta Pintacuda, Joseph S Bowness, Tianyi Zhang, Mafalda Almeida, Bianca Bloechl, Benoit Moindrot, Emma J Carter, Ines Alvarez-Rodrigo, Qi Pan, Ying Bi, Chun-Xiao Song, Neil Brockdorff
Systematic allelic analysis defines the interplay of key pathways in X chromosome inactivation. Nature communications 10 (1) (2019)
Yibin Liu, Paulina Siejka-Zielińska, Gergana Velikova, Ying Bi, Fang Yuan, Marketa Tomkova, Chunsen Bai, Lei Chen, Benjamin Schuster-Böckler, Chun-Xiao Song
Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution. Nature biotechnology 37 (4) (2019)
Alvina G Lai, Donall Forde, Wai Hoong Chang, Fang Yuan, Xiaodong Zhuang, Claudia Orbegozo Rubio, Chun-Xiao Song, Jane A McKeating
Glucose and glutamine availability regulate HepG2 transcriptional responses to low oxygen. Wellcome open research 3 (2018)