Diego Del Alamo

Publication Activity (10 Years)

Years Active: 2020-2022
Publications (10 Years): 6

Top Topics

Molecular Dynamics Simulations

Convolutional Neural Network

Single Molecule

Electron Transfer

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Diego Del Alamo, Davide Sala, Hassane S Mchaourab, Jens Meiler
Sampling alternative conformational states of transporters and receptors with AlphaFold2. eLife 11 (2022)
Diego Del Alamo, Lillian DeSousa, Rahul Mony Nair, Suhaila Rahman, Jens Meiler, Hassane S Mchaourab
Integrated AlphaFold2 and DEER investigation of the conformational dynamics of a pH-dependent APC antiporter. Proceedings of the National Academy of Sciences of the United States of America 119 (34) (2022)
Diego Del Alamo, Cédric Govaerts, Hassane S Mchaourab
AlphaFold2 predicts the inward-facing conformation of the multidrug transporter LmrP. Proteins 89 (9) (2021)
Diego Del Alamo, Kevin L Jagessar, Jens Meiler, Hassane S Mchaourab
Methodology for rigorous modeling of protein conformational changes by Rosetta using DEER distance restraints. PLoS computational biology 17 (6) (2021)
Clara T Schoeder, Samuel Schmitz, Jared Adolf-Bryfogle, Alexander M Sevy, Jessica A Finn, Marion F Sauer, Nina G Bozhanova, Benjamin K Mueller, Amandeep K Sangha, Jaume Bonet, Jonathan H Sheehan, Georg Kuenze, Brennica Marlow, Shannon T Smith, Hope Woods, Brian J Bender, Cristina E Martina, Diego Del Alamo, Pranav Kodali, Alican Gulsevin, William R Schief, Bruno E Correia, James E Crowe, Jens Meiler, Rocco Moretti
Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design. Biochemistry 60 (11) (2021)
Diego Del Alamo, Axel W Fischer, Rocco Moretti, Nathan S Alexander, Jeffrey Mendenhall, Nicholas J Hyman, Jens Meiler
Efficient Sampling of Protein Loop Regions Using Conformational Hashing Complemented with Random Coordinate Descent. Journal of chemical theory and computation 17 (1) (2020)