Ernesto Pérez-Rueda (Ernesto Perez-Rueda)

Scopus Author ID ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 22

Top Topics

Transcription Factor

Network Analysis

Bacillus Subtilis

Top Venues

NAR genomics and bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

André B Farias, Daniel Cortés-Avalos, J Antonio Ibarra, Ernesto Pérez-Rueda
The interaction of InvF-RNAP is mediated by the chaperone SicA in Salmonella sp: an in silico prediction. PeerJ 12 (2024)
André B Farias, Daniel Cortés-Avalos, J Antonio Ibarra, Ernesto Pérez-Rueda
The interaction of InvF-RNAP is mediated by the chaperone SicA in Salmonella sp: an in silico prediction. PeerJ 12 (2024)
Gustavo Sganzerla Martinez, Ernesto Pérez-Rueda, Anuj Kumar, Mansi Sharma, Cinthia Rodríguez Maya, Leonardo Ledesma-Dominguez, Pedro Lenz Casa, Aditya Kumar, Scheila de Avila E Silva, David J Kelvin
CDBProm: the Comprehensive Directory of Bacterial Promoters. NAR genomics and bioinformatics 6 (1) (2024)
Gustavo Sganzerla Martinez, Ernesto Pérez-Rueda, Anuj Kumar, Mansi Sharma, Cinthia Rodríguez Maya, Leonardo Ledesma-Dominguez, Pedro Lenz Casa, Aditya Kumar, Scheila de Avila E Silva, David J Kelvin
CDBProm: the Comprehensive Directory of Bacterial Promoters. NAR genomics and bioinformatics 6 (1) (2024)
Silvia Tenorio-Salgado, José Luis Villalpando-Aguilar, Rafael Hernandez-Guerrero, Augusto César Poot-Hernández, Ernesto Pérez-Rueda
Exploring the enzymatic repertoires of Bacteria and Archaea and their associations with metabolic maps. Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] (2024)
André B Farias, Daniel Cortés-Avalos, J Antonio Ibarra, Ernesto Pérez-Rueda
The interaction of InvF-RNAP is mediated by the chaperone SicA in Salmonella sp: an in silico prediction. PeerJ 12 (2024)
Dagoberto Armenta-Medina, Christian Díaz de León Castañeda, Alma Armenta-Medina, Ernesto Pérez-Rueda
A Bibliometric Analysis of Mexican Bioinformatics: A Portrait of Actors, Structure, and Dynamics. Biology 11 (1) (2022)
Daniel Cortés-Avalos, Noemy Martínez-Pérez, Mario A Ortiz-Moncada, Aylin Juárez-González, Arturo A Baños-Vargas, Paulina Estrada-de Los Santos, Ernesto Pérez-Rueda, Jose Antonio Ibarra
An update of the unceasingly growing and diverse AraC/XylS family of transcriptional activators. FEMS microbiology reviews 45 (5) (2022)
Edgardo Galán-Vásquez, María Del Consuelo Gómez-García, Ernesto Pérez-Rueda
A landscape of gene regulation in the parasitic amoebozoa Entamoeba spp. PloS one 17 (8) (2022)
Gustavo Sganzerla Martinez, Sharmilee Sarkar, Aditya Kumar, Ernesto Pérez-Rueda, Scheila de Avila E Silva
Characterization of promoters in archaeal genomes based on DNA structural parameters. MicrobiologyOpen 10 (5) (2022)
Edgardo Galan-Vasquez, Ernesto Pérez-Rueda
A landscape for drug-target interactions based on network analysis. PloS one 16 (3) (2021)
Herón Navarrete-Euan, Zuemy Rodríguez-Escamilla, Ernesto Pérez-Rueda, Karla Escalante-Herrera, Mario Alberto Martínez-Núñez
Comparing Sediment Microbiomes in Contaminated and Pristine Wetlands along the Coast of Yucatan. Microorganisms 9 (4) (2021)
Gilma Guadalupe Sánchez-Burgos, Nallely M Montalvo-Marin, Edgar R Díaz-Rosado, Ernesto Pérez-Rueda
In Silico Identification of Chikungunya Virus B- and T-Cell Epitopes with High Antigenic Potential for Vaccine Development. Viruses 13 (12) (2021)
Luis Martinez-Liu, Rafael Hernandez-Guerrero, Nancy Rivera-Gomez, Mario Alberto Martínez-Núñez, Pedro Escobar-Turriza, Eveline Peeters, Ernesto Pérez-Rueda
Comparative genomics of DNA-binding transcription factors in archaeal and bacterial organisms. PloS one 16 (7) (2021)
Iván González-Torres, Ernesto Pérez-Rueda, Zahaed Evangelista-Martínez, Andrés Zárate-Romero, Angélica Moreno-Enríquez, Alejandro Huerta-Saquero
Identification of L-asparaginases from Streptomyces strains with competitive activity and immunogenic profiles: a bioinformatic approach. PeerJ 8 (2020)
Hugo Gildardo Castelán-Sánchez, Pablo M Meza-Rodríguez, Erika Carrillo, David I Ríos-Vázquez, Arturo Liñan-Torres, Ramón Alberto Batista-García, Ernesto Pérez-Rueda, Norma Elena Rojas-Ruíz, Sonia Dávila-Ramos
The Microbial Composition in Circumneutral Thermal Springs from Chignahuapan, Puebla, Mexico Reveals the Presence of Particular Sulfur-Oxidizing Bacterial and Viral Communities. Microorganisms 8 (11) (2020)
Israel Sanchez, Rafael Hernandez-Guerrero, Paul Erick Mendez-Monroy, Mario Alberto Martínez-Núñez, Jose Antonio Ibarra, Ernesto Pérez-Rueda
Evaluation of the Abundance of DNA-Binding Transcription Factors in Prokaryotes. Genes 11 (1) (2020)
Emanuel Flores-Bautista, Rafael Hernandez-Guerrero, Alejandro Huerta-Saquero, Silvia Tenorio-Salgado, Nancy Rivera-Gomez, Alba Romero, Jose Antonio Ibarra, Ernesto Pérez-Rueda
Deciphering the functional diversity of DNA-binding transcription factors in Bacteria and Archaea organisms. PloS one 15 (8) (2020)
Pedro Escobar-Turriza, Rafael Hernandez-Guerrero, Augusto Cesar Poot-Hernández, Katya Rodríguez-Vázquez, Jorge Ramírez-Prado, Ernesto Pérez-Rueda
Identification of functional signatures in the metabolism of the three cellular domains of life. PloS one 14 (5) (2019)
Hugo Gildardo Castelán-Sánchez, Paola Elorrieta, Pedro Romoacca, Arturo Liñan-Torres, José Luis Sierra, Ingrid Vera, Ramón Alberto Batista-García, Silvia Tenorio-Salgado, Gabriel Lizama-Uc, Ernesto Pérez-Rueda, María Antonieta Quispe-Ricalde, Sonia Dávila-Ramos
Intermediate-Salinity Systems at High Altitudes in the Peruvian Andes Unveil a High Diversity and Abundance of Bacteria and Viruses. Genes 10 (11) (2019)
Rafael Hernandez-Guerrero, Edgardo Galán-Vásquez, Ernesto Pérez-Rueda
The protein architecture in Bacteria and Archaea identifies a set of promiscuous and ancient domains. PloS one 14 (12) (2019)
Antonia Denis, Mario Alberto Martínez-Núñez, Silvia Tenorio-Salgado, Ernesto Pérez-Rueda
Dissecting the Repertoire of DNA-Binding Transcription Factors of the Archaeon Pyrococcus furiosus DSM 3638. Life (Basel, Switzerland) 8 (4) (2018)