Hebing Chen

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 36

Top Venues

Nature communications

Communications biology

Cancer gene therapy

Cell death & disease

Beijing Institute of Radiation Medicine (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Beijing Institute of Radiation Medicine Sep 01 2010 - Jul 01 2015

China

PHD :: Beijing Institute of Radiation Medicine

Tsinghua University Sep 01 2006 - Jul 01 2010

China

BSC :: Department of Automation

Publications

Hao Li, Zebei Han, Yu Sun, Fu Wang, Pengzhen Hu, Yuang Gao, Xuemei Bai, Shiyu Peng, Chao Ren, Xiang Xu, Zeyu Liu, Hebing Chen, Yang Yang, Xiaochen Bo
CGMega: explainable graph neural network framework with attention mechanisms for cancer gene module dissection. Nature communications 15 (1) (2024)
Xiuxiao Tang, Pengguihang Zeng, Kezhi Liu, Li Qing, Yifei Sun, Xinyi Liu, Lizi Lu, Chao Wei, Jia Wang, Shaoshuai Jiang, Jun Sun, Wakam Chang, Haopeng Yu, Hebing Chen, Jiaguo Zhou, Chengfang Xu, Lili Fan, Yi-Liang Miao, Junjun Ding
The PTM profiling of CTCF reveals the regulation of 3D chromatin structure by O-GlcNAcylation. Nature communications 15 (1) (2024)
Yujun Shuai, Hui Zhang, Changhao Liu, Junting Wang, Yangkai Jiang, Jiayin Sun, Xincheng Gao, Xiaochen Bo, Xingyuan Xiao, Xin Liao, Chao Huang, Hebing Chen, Guosong Jiang
CLIC3 interacts with NAT10 to inhibit N4-acetylcytidine modification of p21 mRNA and promote bladder cancer progression. Cell death & disease 15 (1) (2024)
Jingxuan Xu, Xiang Xu, Dandan Huang, Yawen Luo, Lin Lin, Xuemei Bai, Yang Zheng, Qian Yang, Yu Cheng, An Huang, Jingyi Shi, Xiao-Chen Bo, Jin Gu, Hebing Chen
A comprehensive benchmarking with interpretation and operational guidance for the hierarchy of topologically associating domains. Nature communications 15 (1) (2024)
Jingxuan Xu, Xiang Xu, Dandan Huang, Yawen Luo, Lin Lin, Xuemei Bai, Yang Zheng, Qian Yang, Yu Cheng, An Huang, Jingyi Shi, Xiao-Chen Bo, Jin Gu, Hebing Chen
A comprehensive benchmarking with interpretation and operational guidance for the hierarchy of topologically associating domains. Nature communications 15 (1) (2024)
Xiuxiao Tang, Pengguihang Zeng, Kezhi Liu, Li Qing, Yifei Sun, Xinyi Liu, Lizi Lu, Chao Wei, Jia Wang, Shaoshuai Jiang, Jun Sun, Wakam Chang, Haopeng Yu, Hebing Chen, Jiaguo Zhou, Chengfang Xu, Lili Fan, Yi-Liang Miao, Junjun Ding
The PTM profiling of CTCF reveals the regulation of 3D chromatin structure by O-GlcNAcylation. Nature communications 15 (1) (2024)
Zhangyi Ouyang, Feng Liu, Wanying Li, Junting Wang, Bijia Chen, Yang Zheng, Yaru Li, Huan Tao, Xiang Xu, Cheng Li, Yuwen Cong, Hao Li, Xiao-Chen Bo, Hebing Chen
The developmental and evolutionary characteristics of transcription factor binding site clustered regions based on an explainable machine learning model. Nucleic acids research 52 (13) (2024)
Hao Li, Zebei Han, Yu Sun, Fu Wang, Pengzhen Hu, Yuang Gao, Xuemei Bai, Shiyu Peng, Chao Ren, Xiang Xu, Zeyu Liu, Hebing Chen, Yang Yang, Xiaochen Bo
CGMega: explainable graph neural network framework with attention mechanisms for cancer gene module dissection. Nature communications 15 (1) (2024)
Yujun Shuai, Hui Zhang, Changhao Liu, Junting Wang, Yangkai Jiang, Jiayin Sun, Xincheng Gao, Xiaochen Bo, Xingyuan Xiao, Xin Liao, Chao Huang, Hebing Chen, Guosong Jiang
CLIC3 interacts with NAT10 to inhibit N4-acetylcytidine modification of p21 mRNA and promote bladder cancer progression. Cell death & disease 15 (1) (2024)
Yujun Shuai, Hui Zhang, Changhao Liu, Junting Wang, Yangkai Jiang, Jiayin Sun, Xincheng Gao, Xiaochen Bo, Xingyuan Xiao, Xin Liao, Chao Huang, Hebing Chen, Guosong Jiang
CLIC3 interacts with NAT10 to inhibit N4-acetylcytidine modification of p21 mRNA and promote bladder cancer progression. Cell death & disease 15 (1) (2024)
Zhangyi Ouyang, Feng Liu, Wanying Li, Junting Wang, Bijia Chen, Yang Zheng, Yaru Li, Huan Tao, Xiang Xu, Cheng Li, Yuwen Cong, Hao Li, Xiao-Chen Bo, Hebing Chen
The developmental and evolutionary characteristics of transcription factor binding site clustered regions based on an explainable machine learning model. Nucleic acids research (2024)
Zhangyi Ouyang, Feng Liu, Wanying Li, Junting Wang, Bijia Chen, Yang Zheng, Yaru Li, Huan Tao, Xiang Xu, Cheng Li, Yuwen Cong, Hao Li, Xiao-Chen Bo, Hebing Chen
The developmental and evolutionary characteristics of transcription factor binding site clustered regions based on an explainable machine learning model. Nucleic acids research 52 (13) (2024)
Xiuxiao Tang, Pengguihang Zeng, Kezhi Liu, Li Qing, Yifei Sun, Xinyi Liu, Lizi Lu, Chao Wei, Jia Wang, Shaoshuai Jiang, Jun Sun, Wakam Chang, Haopeng Yu, Hebing Chen, Jiaguo Zhou, Chengfang Xu, Lili Fan, Yi-Liang Miao, Junjun Ding
The PTM profiling of CTCF reveals the regulation of 3D chromatin structure by O-GlcNAcylation. Nature communications 15 (1) (2024)
Hao Li, Zebei Han, Yu Sun, Fu Wang, Pengzhen Hu, Yuang Gao, Xuemei Bai, Shiyu Peng, Chao Ren, Xiang Xu, Zeyu Liu, Hebing Chen, Yang Yang, Xiaochen Bo
CGMega: explainable graph neural network framework with attention mechanisms for cancer gene module dissection. Nature communications 15 (1) (2024)
Guoqing Lv, Qian Wang, Lin Lin, Qiao Ye, Xi Li, Qian Zhou, Xiangzhen Kong, Hongxia Deng, Fuping You, Hebing Chen, Song Wu, Lin Yuan
mTORC2-driven chromatin cGAS mediates chemoresistance through epigenetic reprogramming in colorectal cancer. Nature cell biology (2024)
Jingxuan Xu, Xiang Xu, Dandan Huang, Yawen Luo, Lin Lin, Xuemei Bai, Yang Zheng, Qian Yang, Yu Cheng, An Huang, Jingyi Shi, Xiao-Chen Bo, Jin Gu, Hebing Chen
A comprehensive benchmarking with interpretation and operational guidance for the hierarchy of topologically associating domains. Nature communications 15 (1) (2024)
Junting Wang, Chengyue Zhang, Li Zhang, Hong-Juan Yao, Xiaohong Liu, Yuchen Shi, Junyang Zhao, Xiao-Chen Bo, Hebing Chen, Liang Li
Comparative study on genomic and epigenomic profiles of retinoblastoma or tuberous sclerosis complex via nanopore sequencing and a joint screening framework. Cancer gene therapy 31 (3) (2023)
Longteng Wang, Yang Zheng, Yu Sun, Shulin Mao, Hao Li, Xiao-Chen Bo, Cheng Li, Hebing Chen
TimeTalk uses single-cell RNA-seq datasets to decipher cell-cell communication during early embryo development. Communications biology 6 (1) (2023)
Junting Wang, Chengyue Zhang, Li Zhang, Hong-Juan Yao, Xiaohong Liu, Yuchen Shi, Junyang Zhao, Xiao-Chen Bo, Hebing Chen, Liang Li
Comparative study on genomic and epigenomic profiles of retinoblastoma or tuberous sclerosis complex via nanopore sequencing and a joint screening framework. Cancer gene therapy (2023)
Junting Wang, Chengyue Zhang, Li Zhang, Hong-Juan Yao, Xiaohong Liu, Yuchen Shi, Junyang Zhao, Xiao-Chen Bo, Hebing Chen, Liang Li
Comparative study on genomic and epigenomic profiles of retinoblastoma or tuberous sclerosis complex via nanopore sequencing and a joint screening framework. Cancer gene therapy 31 (3) (2023)
Ting Peng, Yingping Hou, Haowei Meng, Yong Cao, Xiaotian Wang, Lumeng Jia, Qing Chen, Yang Zheng, Yujie Sun, Hebing Chen, Ting-Ting Li, Cheng Li
Mapping nucleolus-associated chromatin interactions using nucleolus Hi-C reveals pattern of heterochromatin interactions. Nature communications 14 (1) (2023)
Ting Peng, Yingping Hou, Haowei Meng, Yong Cao, Xiaotian Wang, Lumeng Jia, Qing Chen, Yang Zheng, Yujie Sun, Hebing Chen, Ting-Ting Li, Cheng Li
Mapping nucleolus-associated chromatin interactions using nucleolus Hi-C reveals pattern of heterochromatin interactions. Nature communications 14 (1) (2023)
Ting Peng, Yingping Hou, Haowei Meng, Yong Cao, Xiaotian Wang, Lumeng Jia, Qing Chen, Yang Zheng, Yujie Sun, Hebing Chen, Ting-Ting Li, Cheng Li
Mapping nucleolus-associated chromatin interactions using nucleolus Hi-C reveals pattern of heterochromatin interactions. Nature communications 14 (1) (2023)
Ting Peng, Yingping Hou, Haowei Meng, Yong Cao, Xiaotian Wang, Lumeng Jia, Qing Chen, Yang Zheng, Yujie Sun, Hebing Chen, Ting-Ting Li, Cheng Li
Mapping nucleolus-associated chromatin interactions using nucleolus Hi-C reveals pattern of heterochromatin interactions. Nature communications 14 (1) (2023)
Junting Wang, Chengyue Zhang, Li Zhang, Hong-Juan Yao, Xiaohong Liu, Yuchen Shi, Junyang Zhao, Xiao-Chen Bo, Hebing Chen, Liang Li
Comparative study on genomic and epigenomic profiles of retinoblastoma or tuberous sclerosis complex via nanopore sequencing and a joint screening framework. Cancer gene therapy 31 (3) (2023)
Yongxing Du, Zongting Gu, Zongze Li, Zan Yuan, Yue Zhao, Xiaohao Zheng, Xiaochen Bo, Hebing Chen, Cheng-Feng Wang
Dynamic Interplay between Structural Variations and 3D Genome Organization in Pancreatic Cancer. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 9 (18) (2022)
Xin Huang, Xiaohan Tang, Xuemei Bai, Honglei Li, Huan Tao, Junting Wang, Yaru Li, Yu Sun, Yang Zheng, Xiang Xu, Longteng Wang, Yang Ding, Meisong Lu, Pingkun Zhou, Xiaochen Bo, Hao Li, Hebing Chen
dbEmbryo multi-omics database for analyses of synergistic regulation in early mammalian embryo development. Genome research (2022)
Yang Ding, Yang Zheng, Junting Wang, Hao Li, Chenghui Zhao, Huan Tao, Yaru Li, Kang Xu, Xin Huang, Ge Gao, Hebing Chen, Xiao-Chen Bo
Recurrent RNA edits in human preimplantation potentially enhance maternal mRNA clearance. Communications biology 5 (1) (2022)
Yang Ding, Yang Zheng, Junting Wang, Hao Li, Chenghui Zhao, Huan Tao, Yaru Li, Kang Xu, Xin Huang, Ge Gao, Hebing Chen, Xiao-Chen Bo
Recurrent RNA edits in human preimplantation potentially enhance maternal mRNA clearance. Communications biology 5 (1) (2022)
Hongjuan Yao, Wenping Song, Rui Cao, Cheng Ye, Li Zhang, Hebing Chen, Junting Wang, Yuchen Shi, Rui Li, Yi Li, Xiujun Liu, Xiaofei Zhou, Rongguang Shao, Liang Li
An EGFR/HER2-targeted conjugate sensitizes gemcitabine-sensitive and resistant pancreatic cancer through different SMAD4-mediated mechanisms. Nature communications 13 (1) (2022)
Yang Ding, Yang Zheng, Junting Wang, Hao Li, Chenghui Zhao, Huan Tao, Yaru Li, Kang Xu, Xin Huang, Ge Gao, Hebing Chen, Xiao-Chen Bo
Recurrent RNA edits in human preimplantation potentially enhance maternal mRNA clearance. Communications biology 5 (1) (2022)
Yang Ding, Yang Zheng, Junting Wang, Hao Li, Chenghui Zhao, Huan Tao, Yaru Li, Kang Xu, Xin Huang, Ge Gao, Hebing Chen, Xiao-Chen Bo
Recurrent RNA edits in human preimplantation potentially enhance maternal mRNA clearance. Communications biology 5 (1) (2022)
Yang Ding, Yang Zheng, Junting Wang, Hao Li, Chenghui Zhao, Huan Tao, Yaru Li, Kang Xu, Xin Huang, Ge Gao, Hebing Chen, Xiao-Chen Bo
Recurrent RNA edits in human preimplantation potentially enhance maternal mRNA clearance. Communications biology 5 (1) (2022)
Hao Hong, Shuai Jiang, Hao Li, Guifang Du, Yu Sun, Huan Tao, Cheng Quan, Chenghui Zhao, Ruijiang Li, Wanying Li, Xiaoyao Yin, Yangchen Huang, Cheng Li, Hebing Chen, Xiaochen Bo
DeepHiC: A generative adversarial network for enhancing Hi-C data resolution. PLoS computational biology 16 (2) (2020)
Ruijiang Li, Shuai Jiang, Wanying Li, Hao Hong, Chenghui Zhao, Xin Huang, Zhuo Zhang, Hao Li, Hebing Chen, Xiaochen Bo
Exploration of prognosis-related microRNA and transcription factor co-regulatory networks across cancer types. RNA biology 16 (8) (2019)
Qiaowei Liu, Hao Li, Lukuan You, Tao Li, Lingling Li, Pingkun Zhou, Xiaochen Bo, Hebing Chen, Xiaohua Chen, Yi Hu
Genome-wide identification and analysis of A-to-I RNA editing events in the malignantly transformed cell lines from bronchial epithelial cell line induced by α-particles radiation. PloS one 14 (6) (2019)

Hebing Chen.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Hebing Chen