Jernej Jakse (Jernej Jakše)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 33

Top Topics

Genome Wide Association

Genetic Diversity

Arabidopsis Thaliana

Top Venues

International journal of molecular sciences

Plants (Basel, Switzerland)

Pathogens (Basel, Switzerland)

Scientific reports

This page only lists publications with an associated author ORCID identifier.

Publications

Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Igor Poljak, Zlatko Šatović
Dig-up Primers : A Pipeline for Identification of Polymorphic Microsatellites Loci within Assemblies of Related Species. International journal of molecular sciences 25 (6) (2024)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Igor Poljak, Zlatko Šatović
Dig-up Primers : A Pipeline for Identification of Polymorphic Microsatellites Loci within Assemblies of Related Species. International journal of molecular sciences 25 (6) (2024)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Igor Poljak, Zlatko Šatović
Dig-up Primers : A Pipeline for Identification of Polymorphic Microsatellites Loci within Assemblies of Related Species. International journal of molecular sciences 25 (6) (2024)
Taja Jeseničnik, Anela Kaurin, Zarja Grgič, Sebastjan Radišek, Jernej Jakse, Nataša Štajner
Novel Identification of the Collection of Pathogenic Fungal Species Verticillium with the Development of Species-Specific SSR Markers. Pathogens (Basel, Switzerland) 12 (4) (2023)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Zlatko Šatović
Variation in Chloroplast Genome Size: Biological Phenomena and Technological Artifacts. Plants (Basel, Switzerland) 12 (2) (2023)
Ivan Radosavljević, Krešimir Križanović, Sara Laura Šarančić, Jernej Jakse
Towards the Investigation of the Adaptive Divergence in a Species of Exceptional Ecological Plasticity: Chromosome-Scale Genome Assembly of Chouardia litardierei (Hyacinthaceae). International journal of molecular sciences 24 (13) (2023)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Zlatko Šatović
Variation in Chloroplast Genome Size: Biological Phenomena and Technological Artifacts. Plants (Basel, Switzerland) 12 (2) (2023)
Taja Jeseničnik, Anela Kaurin, Zarja Grgič, Sebastjan Radišek, Jernej Jakse, Nataša Štajner
Novel Identification of the Collection of Pathogenic Fungal Species Verticillium with the Development of Species-Specific SSR Markers. Pathogens (Basel, Switzerland) 12 (4) (2023)
Taja Jeseničnik, Anela Kaurin, Zarja Grgič, Sebastjan Radišek, Jernej Jakse, Nataša Štajner
Novel Identification of the Collection of Pathogenic Fungal Species Verticillium with the Development of Species-Specific SSR Markers. Pathogens (Basel, Switzerland) 12 (4) (2023)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Zlatko Šatović
Variation in Chloroplast Genome Size: Biological Phenomena and Technological Artifacts. Plants (Basel, Switzerland) 12 (2) (2023)
Taja Jeseničnik, Anela Kaurin, Zarja Grgič, Sebastjan Radišek, Jernej Jakse, Nataša Štajner
Novel Identification of the Collection of Pathogenic Fungal Species Verticillium with the Development of Species-Specific SSR Markers. Pathogens (Basel, Switzerland) 12 (4) (2023)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Zlatko Šatović
Variation in Chloroplast Genome Size: Biological Phenomena and Technological Artifacts. Plants (Basel, Switzerland) 12 (2) (2023)
Filip Varga, Zlatko Liber, Jernej Jakse, Ante Turudić, Zlatko Šatović, Ivan Radosavljević, Nina Jeran, Martina Grdiša
Development of Microsatellite Markers for Tanacetum cinerariifolium (Trevis.) Sch. Bip., a Plant with a Large and Highly Repetitive Genome. Plants (Basel, Switzerland) 11 (13) (2022)
Lucija Slemc, Jernej Jakse, Alessandro Filisetti, Damir Baranasic, Antonio Rodríguez-García, Francesco Del Carratore, Stefano Maria Marino, Jurica Zucko, Antonio Starcevic, Martin Šala, Mercedes Pérez-Bonilla, Marina Sánchez-Hidalgo, Ignacio González, Fernando Reyes, Olga Genilloud, Vicki Springthorpe, Dušan Goranovič, Gregor Kosec, Gavin Hugh Thomas, Davide De Lucrezia, Hrvoje Petković, Miha Tome
Reference-Grade Genome and Large Linear Plasmid of Streptomyces rimosus: Pushing the Limits of Nanopore Sequencing. Microbiology spectrum 10 (2) (2022)
Andrej Sečnik, Nataša Štajner, Sebastjan Radišek, Urban Kunej, Mitja Križman, Jernej Jakse
Cytosine Methylation in Genomic DNA and Characterization of DNA Methylases and Demethylases and Their Expression Profiles in Viroid-Infected Hop Plants ( Humulus lupulus Var. 'Celeia'). Cells 11 (16) (2022)
Mitja Križman, Jernej Jakse
Chemical and Genetic Variability of Istrian Foeniculum vulgare Wild Populations. Plants (Basel, Switzerland) 11 (17) (2022)
Vanja Miljanić, Jernej Jakse, Denis Rusjan, Andreja Škvarč, Nataša Štajner
Small RNA Sequencing and Multiplex RT-PCR for Diagnostics of Grapevine Viruses and Virus-like Organisms. Viruses 14 (5) (2022)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Zlatko Šatović
Chloroplast Genome Annotation Tools: Prolegomena to the Identification of Inverted Repeats. International journal of molecular sciences 23 (18) (2022)
Taja Jeseničnik, Nataša Štajner, Sebastjan Radišek, Ajay Kumar Mishra, Katarina Košmelj, Urban Kunej, Jernej Jakse
Discovery of microRNA-like Small RNAs in Pathogenic Plant Fungus Verticillium nonalfalfae Using High-Throughput Sequencing and qPCR and RLM-RACE Validation. International journal of molecular sciences 23 (2) (2022)
Urban Kunej, Jernej Jakse, Sebastjan Radišek, Nataša Štajner
Identification and Characterization of Verticillium nonalfalfae-Responsive MicroRNAs in the Roots of Resistant and Susceptible Hop Cultivars. Plants (Basel, Switzerland) 10 (9) (2021)
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakse, Filip Varga, Zlatko Šatović
Towards the Well-Tempered Chloroplast DNA Sequences. Plants (Basel, Switzerland) 10 (7) (2021)
Aida Dervishi, Jernej Jakse, Hairi Ismaili, Branka Javornik, Nataša Štajner
Genetic Structure and Core Collection of Olive Germplasm from Albania Revealed by Microsatellite Markers. Genes 12 (2) (2021)
Djivan Prentout, Natasa Stajner, Andreja Cerenak, Theo Tricou, Celine Brochier-Armanet, Jernej Jakse, Jos Käfer, Gabriel A B Marais
Plant genera Cannabis and Humulus share the same pair of well-differentiated sex chromosomes. The New phytologist 231 (4) (2021)
Urban Kunej, Aida Dervishi, Valérie Laucou, Jernej Jakse, Nataša Štajner
The Potential of HTS Approaches for Accurate Genotyping in Grapevine (Vitis vinifera L.). Genes 11 (8) (2020)
Ankita Shrestha, Ajay Kumar Mishra, Jaroslav Matoušek, Lenka Steinbachová, David Potesil, Vishnu Sukumari Nath, Praveen Awasthi, Tomáš Kocábek, Jernej Jakse, Lenka Záveská Drábková, Zbyněk Zdráhal, David Honys, Gerhard Steger
Integrated Proteo-Transcriptomic Analyses Reveal Insights into Regulation of Pollen Development Stages and Dynamics of Cellular Response to Apple Fruit Crinkle Viroid (AFCVd)-Infection in Nicotiana tabacum. International journal of molecular sciences 21 (22) (2020)
Vishnu Sukumari Nath, Ankita Shrestha, Praveen Awasthi, Ajay Kumar Mishra, Tomáš Kocábek, Jaroslav Matoušek, Andrej Sečnik, Jernej Jakse, Sebastjan Radišek, Vipin Hallan
Mapping the Gene Expression Spectrum of Mediator Subunits in Response to Viroid Infection in Plants. International journal of molecular sciences 21 (7) (2020)
Tim Weber, Jernej Jakse, Barbara Sladonja, Dario Hruševar, Nediljko Landeka, Slavko Brana, Borut Bohanec, Milenko Milović, Dalibor Vladović, Božena Mitić, Danijela Poljuha
Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area. Plants (Basel, Switzerland) 9 (9) (2020)
Andreja Čerenak, Zala Kolenc, Petra Sehur, Simon P Whittock, Anthony Koutoulis, Ron A Beatson, Emily Buck, Branka Javornik, Suzana Škof, Jernej Jakse
New Male Specific Markers for Hop and Application in Breeding Program. Scientific reports 9 (1) (2019)
Nataša Štajner, Sebastjan Radišek, Ajay Kumar Mishra, Vishnu Sukumari Nath, Jaroslav Matoušek, Jernej Jakse
Evaluation of Disease Severity and Global Transcriptome Response Induced by Citrus bark cracking viroid, Hop latent viroid, and Their Co-Infection in Hop (Humulus lupulus L.). International journal of molecular sciences 20 (13) (2019)
Ajay Kumar Mishra, Tomáš Kocábek, Vishnu Sukumari Nath, Praveen Awasthi, Ankita Shrestha, Uday Kumar Killi, Jernej Jakse, Josef Patzak, Karel Krofta, Jaroslav Matoušek
Dissection of Dynamic Transcriptome Landscape of Leaf, Bract, and Lupulin Gland in Hop (Humulus lupulus L.). International journal of molecular sciences 21 (1) (2019)
Vishnu Sukumari Nath, Ajay Kumar Mishra, Atul Kumar, Jaroslav Matoušek, Jernej Jakse
Revisiting the Role of Transcription Factors in Coordinating the Defense Response Against Citrus Bark Cracking Viroid Infection in Commercial Hop (Humulus Lupulus L.). Viruses 11 (5) (2019)
Taja Jeseničnik, Nataša Štajner, Sebastjan Radišek, Jernej Jakse
RNA interference core components identified and characterised in Verticillium nonalfalfae, a vascular wilt pathogenic plant fungi of hops. Scientific reports 9 (1) (2019)
Tine Pokorn, Sebastjan Radišek, Branka Javornik, Nataša Štajner, Jernej Jakse
Development of hop transcriptome to support research into host-viroid interactions. PloS one 12 (9) (2017)