Jonathan E Rubin (J E Rubin, Jonathan Rubin)

Pitt ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 44

Top Venues

bioRxiv : the preprint server for biology

eLife

Brain structure & function

PLoS computational biology

Brown University (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Brown University

United States

PHD :: Division of Applied Mathematics

Publications

Sushmita R John, Ryan S Phillips, Jonathan E Rubin
A novel mechanism for ramping bursts based on slow negative feedback in model respiratory neurons. Chaos (Woodbury, N.Y.) 34 (6) (2024)
Baram Sosis, Jonathan E Rubin
Distinct dopaminergic spike-timing-dependent plasticity rules are suited to different functional roles. bioRxiv : the preprint server for biology (2024)
Jyotika Bahuguna, Timothy D Verstynen, Jonathan E Rubin
How cortico-basal ganglia-thalamic subnetworks can shift decision policies to maximize reward rate. bioRxiv : the preprint server for biology (2024)
Jyotika Bahuguna, Timothy D Verstynen, Jonathan E Rubin
How cortico-basal ganglia-thalamic subnetworks can shift decision policies to maximize reward rate. bioRxiv : the preprint server for biology (2024)
Jyotika Bahuguna, Timothy D Verstynen, Jonathan E Rubin
How cortico-basal ganglia-thalamic subnetworks can shift decision policies to maximize reward rate. bioRxiv : the preprint server for biology (2024)
Cristina Giossi, Jonathan E Rubin, Aryn Gittis, Timothy Verstynen, Catalina Vich
Rethinking the external globus pallidus and information flow in cortico-basal ganglia-thalamic circuits. The European journal of neuroscience (2024)
Cristina Giossi, Jonathan E Rubin, Aryn Gittis, Timothy Verstynen, Catalina Vich
Rethinking the external globus pallidus and information flow in cortico-basal ganglia-thalamic circuits. The European journal of neuroscience (2024)
Baram Sosis, Jonathan E Rubin
Distinct dopaminergic spike-timing-dependent plasticity rules are suited to different functional roles. bioRxiv : the preprint server for biology (2024)
Sushmita R John, Ryan S Phillips, Jonathan E Rubin
A novel mechanism for ramping bursts based on slow negative feedback in model respiratory neurons. Chaos (Woodbury, N.Y.) 34 (6) (2024)
Jyotika Bahuguna, Timothy D Verstynen, Jonathan E Rubin
How cortico-basal ganglia-thalamic subnetworks can shift decision policies to maximize reward rate. bioRxiv : the preprint server for biology (2024)
Cristina Giossi, Jyotika Bahuguna, Jonathan E Rubin, Timothy D Verstynen, Catalina Vich
Arkypallidal neurons in the external globus pallidus can mediate inhibitory control by altering competition in the striatum. bioRxiv : the preprint server for biology (2024)
Sushmita R John, Ryan S Phillips, Jonathan E Rubin
A novel mechanism for ramping bursts based on slow negative feedback in model respiratory neurons. Chaos (Woodbury, N.Y.) 34 (6) (2024)
John E Parker, Asier Aristieta, Aryn H Gittis, Jonathan E Rubin
Introducing the STReaC (Spike Train Response Classification) toolbox. Journal of neuroscience methods 401 (2023)
Krista Alexandria Marie Bond, Javier Rasero Daparte, Raghav Madan, Jyotika Bahuguna, Jonathan E Rubin, Timothy D Verstynen
Competing neural representations of choice shape evidence accumulation in humans. eLife 12 (2023)
Marcello G Codianni, Jonathan E Rubin
A spiking computational model for striatal cholinergic interneurons. Brain structure & function 228 (2) (2023)
Marcello G Codianni, Jonathan E Rubin
A spiking computational model for striatal cholinergic interneurons. Brain structure & function (2023)
S R John, W H Barnett, Ana Paula Abdala, Daniel B Zoccal, Jonathan E Rubin, Yaroslav I Molkov
Exploring the role of the Kölliker-Fuse nucleus in breathing variability by mathematical modelling. The Journal of physiology (2023)
Marcello G Codianni, Jonathan E Rubin
A spiking computational model for striatal cholinergic interneurons. Brain structure & function 228 (2) (2023)
John E Parker, Asier Aristieta, Aryn H Gittis, Jonathan E Rubin
Introducing the STReaC (Spike Train Response Classification) toolbox. Journal of neuroscience methods 401 (2023)
John E Parker, Asier Aristieta, Aryn H Gittis, Jonathan E Rubin
Introducing the STReaC (Spike Train Response Classification) toolbox. Journal of neuroscience methods 401 (2023)
Marcello G Codianni, Jonathan E Rubin
A spiking computational model for striatal cholinergic interneurons. Brain structure & function 228 (2) (2023)
John E Parker, Asier Aristieta, Aryn H Gittis, Jonathan E Rubin
Introducing the STReaC (Spike Train Response Classification) toolbox. Journal of neuroscience methods 401 (2023)
Nicholas Theis, Jyotika Bahuguna, Jonathan E Rubin, Brendan Muldoon, Konasale M Prasad
Energy in functional brain states correlates with cognition in adolescent schizophrenia and healthy persons. bioRxiv : the preprint server for biology (2023)
Catalina Vich, Matthew Clapp, Jonathan E Rubin, Timothy D Verstynen
Identifying control ensembles for information processing within the cortico-basal ganglia-thalamic circuit. PLoS computational biology 18 (6) (2022)
Madeline McCrea, G Bard Ermentrout, Jonathan E Rubin
A model for the collective synchronization of flashing in <i>Photinus carolinus</i>. Journal of the Royal Society, Interface 19 (195) (2022)
Ryan S Phillips, Jonathan E Rubin
Putting the theory into 'burstlet theory' with a biophysical model of burstlets and bursts in the respiratory preBötzinger complex. eLife 11 (2022)
Ryan S Phillips, Hidehiko Koizumi, Yaroslav I Molkov, Jonathan E Rubin, Jeffrey C Smith
Predictions and experimental tests of a new biophysical model of the mammalian respiratory oscillator. eLife 11 (2022)
Krista Alexandria Marie Bond, Kyle Dunovan, Alexis Porter, Jonathan E Rubin, Timothy D Verstynen
Dynamic decision policy reconfiguration under outcome uncertainty. eLife 10 (2021)
Yangyang Wang, Jonathan E Rubin
Complex bursting dynamics in an embryonic respiratory neuron model. Chaos (Woodbury, N.Y.) 30 (4) (2021)
Muhammad U Abdulla, Ryan S Phillips, Jonathan E Rubin
Dynamics of ramping bursts in a respiratory neuron model. Journal of computational neuroscience (2021)
Bettina C Schwab, Daisuke Kase, Andrew Zimnik, Robert Rosenbaum, Marcello G Codianni, Jonathan E Rubin, Robert S Turner
Neural activity during a simple reaching task in macaques is counter to gating and rebound in basal ganglia-thalamic communication. PLoS biology 18 (10) (2020)
Marcello G Codianni, Silvia Daun, Jonathan E Rubin
The roles of ascending sensory signals and top-down central control in the entrainment of a locomotor CPG. Biological cybernetics 114 (6) (2020)
Jonathan E Rubin, Catalina Vich, Matthew Clapp, Kendra Noneman, Timothy D Verstynen
The credit assignment problem in cortico-basal ganglia-thalamic networks: A review, a problem and a possible solution. The European journal of neuroscience 53 (7) (2020)
Meredith L Greer, Olcay Akman, Timothy D Comar, Daniel Hrozencik, Jonathan E Rubin
Paying Our Dues: The Role of Professional Societies in the Evolution of Mathematical Biology Education. Bulletin of mathematical biology 82 (5) (2020)
Timothy C Whalen, Amanda M Willard, Jonathan E Rubin, Aryn H Gittis
Delta oscillations are a robust biomarker of dopamine depletion severity and motor dysfunction in awake mice. Journal of neurophysiology 124 (2) (2020)
Ryan S Phillips, Ian Rosner, Aryn H Gittis, Jonathan E Rubin
The effects of chloride dynamics on substantia nigra pars reticulata responses to pallidal and striatal inputs. eLife 9 (2020)
Jonathan E Rubin, Jeffrey C Smith
Robustness of respiratory rhythm generation across dynamic regimes. PLoS computational biology 15 (7) (2019)
Ryan S Phillips, Jonathan E Rubin
Effects of persistent sodium current blockade in respiratory circuits depend on the pharmacological mechanism of action and network dynamics. PLoS computational biology 15 (8) (2019)
Samuel Wittman, Ana Paula Abdala, Jonathan E Rubin
Reduced computational modelling of Kölliker-Fuse contributions to breathing patterns in Rett syndrome. The Journal of physiology 597 (10) (2019)
Kyle Dunovan, Catalina Vich, Matthew Clapp, Timothy D Verstynen, Jonathan E Rubin
Reward-driven changes in striatal pathway competition shape evidence evaluation in decision-making. PLoS computational biology 15 (5) (2019)
Victoria L Corbit, Timothy C Whalen, Kevin T Zitelli, Stephanie Y Crilly, Jonathan E Rubin, Aryn H Gittis
Pallidostriatal Projections Promote β Oscillations in a Dopamine-Depleted Biophysical Network Model. The Journal of neuroscience : the official journal of the Society for Neuroscience 36 (20) (2017)
Yangyang Wang, Jonathan E Rubin
Multiple timescale mixed bursting dynamics in a respiratory neuron model. Journal of computational neuroscience 41 (3) (2016)
Bartholomew J Bacak, Taegyo Kim, Jeffrey C Smith, Jonathan E Rubin, Ilya A Rybak
Mixed-mode oscillations and population bursting in the pre-Bötzinger complex. eLife 5 (2016)
Wei Wei, Jonathan E Rubin, Xiao-Jing Wang
Role of the indirect pathway of the basal ganglia in perceptual decision making. The Journal of neuroscience : the official journal of the Society for Neuroscience 35 (9) (2015)

Jonathan E Rubin.css-eqlu8i{font-size:small;padding-left:4px;} (J E Rubin, Jonathan Rubin)

Publication Activity (10 Years)

Top Topics

Top Venues

Jonathan E Rubin (J E Rubin, Jonathan Rubin)