Le-Yi Wei (Jing Liu, Leyi Wei)

Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 43

Top Venues

Journal of chemical information and modeling

Briefings in bioinformatics

Bioinformatics (Oxford, England)

Nucleic acids research

Tianjin University

Xiamen University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Tianjin University

China

Assistant Professor :: School of Computer Science and Technology

Education History

Xiamen University Sep 15 2013 - Jun 30 2016

China

PHD :: School of Software

Xiamen University Sep 15 2010 - Jul 01 2013

China

MSC :: Department of Computer Science

Xiamen University Sep 15 2006 - Jul 01 2010

China

BSC :: School of Mathematical Sciences

Publications

Chenglin Yin, Ruheng Wang, Jianbo Qiao, Hua Shi, Hongliang Duan, Xinbo Jiang, Saisai Teng, Le-Yi Wei
NanoCon: contrastive learning-based deep hybrid network for nanopore methylation detection. Bioinformatics (Oxford, England) 40 (2) (2024)
Yanxi Zhao, Junru Jin, Wenjia Gao, Jianbo Qiao, Le-Yi Wei
Moss-m7G: A Motif-Based Interpretable Deep Learning Method for RNA N7-Methlguanosine Site Prediction. Journal of chemical information and modeling (2024)
Jiashuo Zhang, Ruheng Wang, Le-Yi Wei
MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins. Journal of chemical information and modeling (2024)
Yanxi Zhao, Junru Jin, Wenjia Gao, Jianbo Qiao, Le-Yi Wei
Moss-m7G: A Motif-Based Interpretable Deep Learning Method for RNA N7-Methlguanosine Site Prediction. Journal of chemical information and modeling 64 (15) (2024)
Ding Wang, Junru Jin, Zhongshen Li, Yu Wang, Mushuang Fan, Sirui Liang, Ran Su, Le-Yi Wei
StructuralDPPIV: a novel deep learning model based on atom structure for predicting dipeptidyl peptidase-IV inhibitory peptides. Bioinformatics (Oxford, England) 40 (2) (2024)
Jiashuo Zhang, Ruheng Wang, Le-Yi Wei
MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins. Journal of chemical information and modeling 64 (3) (2024)
Jiashuo Zhang, Ruheng Wang, Le-Yi Wei
MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins. Journal of chemical information and modeling 64 (3) (2024)
Yitian Fang, Mingshuang Luo, Zhixiang Ren, Le-Yi Wei, Dong-Qing Wei
CELA-MFP: a contrast-enhanced and label-adaptive framework for multi-functional therapeutic peptides prediction. Briefings in bioinformatics 25 (4) (2024)
Jiashuo Zhang, Ruheng Wang, Le-Yi Wei
MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins. Journal of chemical information and modeling 64 (3) (2024)
Yitian Fang, Mingshuang Luo, Zhixiang Ren, Le-Yi Wei, Dong-Qing Wei
CELA-MFP: a contrast-enhanced and label-adaptive framework for multi-functional therapeutic peptides prediction. Briefings in bioinformatics 25 (4) (2024)
Chenglin Yin, Ruheng Wang, Jianbo Qiao, Hua Shi, Hongliang Duan, Xinbo Jiang, Saisai Teng, Le-Yi Wei
NanoCon: contrastive learning-based deep hybrid network for nanopore methylation detection. Bioinformatics (Oxford, England) 40 (2) (2024)
Jiashuo Zhang, Ruheng Wang, Le-Yi Wei
MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins. Journal of chemical information and modeling 64 (3) (2024)
Yitian Fang, Fan Xu, Lesong Wei, Yi Jiang, Jie Chen, Le-Yi Wei, Dong-Qing Wei
AFP-MFL: accurate identification of antifungal peptides using multi-view feature learning. Briefings in bioinformatics 24 (1) (2023)
Zhongshen Li, Junru Jin, Yu Wang, Wentao Long, Yuanhao Ding, Haiyan Hu, Le-Yi Wei
ExamPle: explainable deep learning framework for the prediction of plant small secreted peptides. Bioinformatics (Oxford, England) 39 (3) (2023)
Haoqing Yu, Ruheng Wang, Jianbo Qiao, Le-Yi Wei
Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design. Journal of chemical information and modeling 64 (1) (2023)
Haoqing Yu, Ruheng Wang, Jianbo Qiao, Le-Yi Wei
Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design. Journal of chemical information and modeling (2023)
Haoqing Yu, Ruheng Wang, Jianbo Qiao, Le-Yi Wei
Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design. Journal of chemical information and modeling 64 (1) (2023)
Yitian Fang, Fan Xu, Lesong Wei, Yi Jiang, Jie Chen, Le-Yi Wei, Dong-Qing Wei
AFP-MFL: accurate identification of antifungal peptides using multi-view feature learning. Briefings in bioinformatics (2023)
Yitian Fang, Fan Xu, Lesong Wei, Yi Jiang, Jie Chen, Le-Yi Wei, Dong-Qing Wei
AFP-MFL: accurate identification of antifungal peptides using multi-view feature learning. Briefings in bioinformatics 24 (1) (2023)
Tianshuo Wang, Ruheng Wang, Le-Yi Wei
AttenSyn: An Attention-Based Deep Graph Neural Network for Anticancer Synergistic Drug Combination Prediction. Journal of chemical information and modeling (2023)
Xin Zhang, Lesong Wei, Xiucai Ye, Kai Zhang, Saisai Teng, Zhongshen Li, Junru Jin, Min Jae Kim, Tetsuya Sakurai, Lizhen Cui, Balachandran Manavalan, Le-Yi Wei
SiameseCPP: a sequence-based Siamese network to predict cell-penetrating peptides by contrastive learning. Briefings in bioinformatics 24 (1) (2023)
Chao Pang, Jianbo Qiao, Xiangxiang Zeng, Guishen Wang, Le-Yi Wei
Deep Generative Models in De Novo Drug Molecule Generation. Journal of chemical information and modeling (2023)
Haoqing Yu, Ruheng Wang, Jianbo Qiao, Le-Yi Wei
Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design. Journal of chemical information and modeling 64 (1) (2023)
Xin Zhang, Lesong Wei, Xiucai Ye, Kai Zhang, Saisai Teng, Zhongshen Li, Junru Jin, Min Jae Kim, Tetsuya Sakurai, Lizhen Cui, Balachandran Manavalan, Le-Yi Wei
SiameseCPP: a sequence-based Siamese network to predict cell-penetrating peptides by contrastive learning. Briefings in bioinformatics 24 (1) (2023)
Yu Wang, Chao Pang, Yuzhe Wang, Junru Jin, Jingjie Zhang, Xiangxiang Zeng, Ran Su, Guishen Wang, Le-Yi Wei
Retrosynthesis prediction with an interpretable deep-learning framework based on molecular assembly tasks. Nature communications 14 (1) (2023)
Yi Jiang, Ruheng Wang, Jiuxin Feng, Junru Jin, Sirui Liang, Zhongshen Li, Yingying Yu, Anjun Ma, Ran Su, Quan Zou, Qin Ma, Le-Yi Wei
Explainable Deep Hypergraph Learning Modeling the Peptide Secondary Structure Prediction. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2023)
Ruheng Wang, Yi Jiang, Junru Jin, Chenglin Yin, Haoqing Yu, Fengsheng Wang, Jiuxin Feng, Ran Su, Kenta Nakai, Guishen Wang, Le-Yi Wei
DeepBIO: an automated and interpretable deep-learning platform for high-throughput biological sequence prediction, functional annotation and visualization analysis. Nucleic acids research (2023)
Xuetong Yang, Junru Jin, Ruheng Wang, Zhongshen Li, Yu Wang, Le-Yi Wei
CACPP: A Contrastive Learning-Based Siamese Network to Identify Anticancer Peptides Based on Sequence Only. Journal of chemical information and modeling (2023)
Ruheng Wang, Junru Jin, Guishen Wang, Kenta Nakai, Le-Yi Wei
Predicting protein-peptide binding residues via interpretable deep learning. Bioinformatics (Oxford, England) 38 (13) (2022)
Chichi Dai, Yi Jiang, Chenglin Yin, Ran Su, Xiangxiang Zeng, Guishen Wang, Kenta Nakai, Le-Yi Wei
scIMC: a platform for benchmarking comparison and visualization analysis of scRNA-seq data imputation methods. Nucleic acids research 50 (9) (2022)
Fengsheng Wang, Le-Yi Wei
Multi-scale deep learning for the imbalanced multi-label protein subcellular localization prediction based on immunohistochemistry images. Bioinformatics (Oxford, England) 38 (9) (2022)
Xin Zhang, Lesong Wei, Xiucai Ye, Kai Zhang, Saisai Teng, Zhongshen Li, Junru Jin, Min Jae Kim, Tetsuya Sakurai, Lizhen Cui, Balachandran Manavalan, Le-Yi Wei
SiameseCPP: a sequence-based Siamese network to predict cell-penetrating peptides by contrastive learning. Briefings in bioinformatics (2022)
Shaherin Basith, Md Mehedi Hasan, Gwang Lee, Le-Yi Wei, Balachandran Manavalan
Integrative machine learning framework for the identification of cell-specific enhancers from the human genome. Briefings in bioinformatics 22 (6) (2022)
Wenjia He, Yi Jiang, Junru Jin, Zhongshen Li, Jiaojiao Zhao, Balachandran Manavalan, Ran Su, Xin Gao, Le-Yi Wei
Accelerating bioactive peptide discovery via mutual information-based meta-learning. Briefings in bioinformatics (2021)
Chichi Dai, Pengmian Feng, Lizhen Cui, Ran Su, Wei Chen, Le-Yi Wei
Iterative feature representation algorithm to improve the predictive performance of N7-methylguanosine sites. Briefings in bioinformatics 22 (4) (2021)
Hao Cheng, Bing Rao, Lei Liu, Lizhen Cui, Guobao Xiao, Ran Su, Le-Yi Wei
PepFormer: End-to-End Transformer-Based Siamese Network to Predict and Enhance Peptide Detectability Based on Sequence Only. Analytical chemistry 93 (16) (2021)
Lesong Wei, Xiucai Ye, Yuyang Xue, Tetsuya Sakurai, Le-Yi Wei
ATSE: a peptide toxicity predictor by exploiting structural and evolutionary information based on graph neural network and attention mechanism. Briefings in bioinformatics 22 (5) (2021)
Le-Yi Wei, Wenjia He, Adeel Malik, Ran Su, Lizhen Cui, Balachandran Manavalan
Computational prediction and interpretation of cell-specific replication origin sites from multiple eukaryotes by exploiting stacking framework. Briefings in bioinformatics 22 (4) (2021)
Liang Tian, Le-Yi Wei, Wei Guo
Three-Dimensional Face Reconstruction Using Multi-View-Based Bilinear Model. Sensors (Basel, Switzerland) 19 (3) (2019)
Xinrui Wang, Zhijun Liao, Zhimin Bai, Yan He, Juan Duan, Le-Yi Wei
MiR-93-5p Promotes Cell Proliferation through Down-Regulating PPARGC1A in Hepatocellular Carcinoma Cells by Bioinformatics Analysis and Experimental Verification. Genes 9 (1) (2018)
Dingyu Liu, Zhitao Mao, Jiaxin Guo, Le-Yi Wei, Hongwu Ma, Ya-Jie Tang, Tao Chen, Zhi-Wen Wang, Xueming Zhao
Construction, Model-Based Analysis, and Characterization of a Promoter Library for Fine-Tuned Gene Expression in Bacillus subtilis. ACS synthetic biology 7 (7) (2018)
Pu-Feng Du, Wei Zhao, Yang-Yang Miao, Le-Yi Wei, Likun Wang
UltraPse: A Universal and Extensible Software Platform for Representing Biological Sequences. International journal of molecular sciences 18 (11) (2017)
Le-Yi Wei, PengWei Xing, Ran Su, Gaotao Shi, Zhanshan Sam Ma, Guishen Wang
CPPred-RF: A Sequence-based Predictor for Identifying Cell-Penetrating Peptides and Their Uptake Efficiency. Journal of proteome research 16 (5) (2017)

Le-Yi Wei.css-eqlu8i{font-size:small;padding-left:4px;} (Jing Liu, Leyi Wei)

Publication Activity (10 Years)

Top Topics

Top Venues

Le-Yi Wei (Jing Liu, Leyi Wei)