Lin Frank Song

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 20

Top Topics

Aqueous Solution

Molecular Dynamics

Top Venues

Journal of chemical theory and computation

Journal of chemical information and modeling

The journal of physical chemistry. B

Journal of the American Chemical Society

This page only lists publications with an associated author ORCID identifier.

Publications

Majid Jafari, Zhen Li, Lin Frank Song, Luca Sagresti, Giuseppe Brancato, Kenneth M Merz
Thermodynamics of Metal-Acetate Interactions. The journal of physical chemistry. B 128 (3) (2024)
Majid Jafari, Zhen Li, Lin Frank Song, Luca Sagresti, Giuseppe Brancato, Kenneth M Merz
Thermodynamics of Metal-Acetate Interactions. The journal of physical chemistry. B (2024)
Basak Koca Fındık, Majid Jafari, Lin Frank Song, Zhen Li, Viktorya Aviyente, Kenneth M Merz
Binding of Phosphate Species to Ca 2+ and Mg 2+ in Aqueous Solution. Journal of chemical theory and computation (2024)
Basak Koca Fındık, Majid Jafari, Lin Frank Song, Zhen Li, Viktorya Aviyente, Kenneth M Merz
Binding of Phosphate Species to Ca 2+ and Mg 2+ in Aqueous Solution. Journal of chemical theory and computation 20 (10) (2024)
Basak Koca Fındık, Majid Jafari, Lin Frank Song, Zhen Li, Viktorya Aviyente, Kenneth M Merz
Binding of Phosphate Species to Ca 2+ and Mg 2+ in Aqueous Solution. Journal of chemical theory and computation 20 (10) (2024)
Basak Koca Fındık, Majid Jafari, Lin Frank Song, Zhen Li, Viktorya Aviyente, Kenneth M Merz
Binding of Phosphate Species to Ca 2+ and Mg 2+ in Aqueous Solution. Journal of chemical theory and computation 20 (10) (2024)
Zhen Li, Lin Frank Song, Gaurav Sharma, Basak Koca Fındık, Kenneth M Merz
Accurate Metal-Imidazole Interactions. Journal of chemical theory and computation (2022)
Jun Pei, Lin Frank Song, Kenneth M Merz
FFENCODER-PL: Pair Wise Energy Descriptors for Protein-Ligand Pose Selection. Journal of chemical theory and computation 17 (10) (2021)
Arkajyoti Sengupta, Zhen Li, Lin Frank Song, Pengfei Li, Kenneth M Merz
Correction to "Parameterization of Monovalent Ions for the OPC3, OPC, TIP3P-FB, and TIP4P-FB Water Models". Journal of chemical information and modeling 61 (7) (2021)
Zhen Li, Lin Frank Song, Pengfei Li, Kenneth M Merz
Parametrization of Trivalent and Tetravalent Metal Ions for the OPC3, OPC, TIP3P-FB, and TIP4P-FB Water Models. Journal of chemical theory and computation 17 (4) (2021)
Arkajyoti Sengupta, Zhen Li, Lin Frank Song, Pengfei Li, Kenneth M Merz
Parameterization of Monovalent Ions for the OPC3, OPC, TIP3P-FB, and TIP4P-FB Water Models. Journal of chemical information and modeling 61 (2) (2021)
Lin Frank Song, Arkajyoti Sengupta, Kenneth M Merz
Thermodynamics of Transition Metal Ion Binding to Proteins. Journal of the American Chemical Society 142 (13) (2020)
Lin Frank Song, Kenneth M Merz
Evolution of Alchemical Free Energy Methods in Drug Discovery. Journal of chemical information and modeling 60 (11) (2020)
Zhen Li, Lin Frank Song, Pengfei Li, Kenneth M Merz
Systematic Parametrization of Divalent Metal Ions for the OPC3, OPC, TIP3P-FB, and TIP4P-FB Water Models. Journal of chemical theory and computation 16 (7) (2020)
Jun Pei, Lin Frank Song, Kenneth M Merz
Pair Potentials as Machine Learning Features. Journal of chemical theory and computation 16 (8) (2020)
Jun Pei, Zheng Zheng, Hyunji Kim, Lin Frank Song, Sarah Walworth, Margaux R Merz, Kenneth M Merz
Random Forest Refinement of Pairwise Potentials for Protein-Ligand Decoy Detection. Journal of chemical information and modeling 59 (7) (2019)
Lin Frank Song, Tai-Sung Lee, Jin-Xia Liang, Darrin M York, Kenneth M Merz
Using AMBER18 for Relative Free Energy Calculations. Journal of chemical information and modeling 59 (7) (2019)
Zheng Zheng, Jun Pei, Nupur Bansal, Hao Liu, Lin Frank Song, Kenneth M Merz
Generation of Pairwise Potentials Using Multidimensional Data Mining. Journal of chemical theory and computation 14 (10) (2018)
Nupur Bansal, Zheng Zheng, Lin Frank Song, Jun Pei, Kenneth M Merz
The Role of the Active Site Flap in Streptavidin/Biotin Complex Formation. Journal of the American Chemical Society 140 (16) (2018)
Li-Li Pan, Lin Frank Song, Yipu Miao, Yue Yang, Kenneth M Merz
Mechanism of Formation of the Nonstandard Product in the Prenyltransferase Reaction of the G115T Mutant of FtmPT1: A Case of Reaction Dynamics Calling the Shots? Biochemistry 56 (24) (2017)