Mehdi D Davari

Loop profile Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 39

Top Venues

International journal of molecular sciences

Journal of the American Chemical Society

JACS Au

Briefings in bioinformatics

RWTH Aachen University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

RWTH Aachen University Jul 01 2013

Germany

Head of Division Computational Biology :: Insititute of Biotechnology

Max-Planck-Gesellschaft Feb 01 2010 - May 31 2013

Germany

Postdoc Research Fellow :: Theoretical and Computational Biophysics Department

Publications

Montserrat Goles, Anamaria Sanchez-Daza, Gabriel Cabas-Mora, Lindybeth Sarmiento-Varón, Julieta Haydee Sepúlveda Yáñez, Hoda Anvari-Kazemabad, Mehdi D Davari, Roberto Uribe-Paredes, Alvaro Olivera-Nappa, Marcelo A Navarrete, David Medina-Ortiz
Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides. Briefings in bioinformatics 25 (4) (2024)
Alexander-Maurice Illig, Niklas E Siedhoff, Mehdi D Davari, Ulrich Schwaneberg
Evolutionary Probability and Stacked Regressions Enable Data-Driven Protein Engineering with Minimized Experimental Effort. Journal of chemical information and modeling (2024)
Malte Moeller, Dipendu Dhar, Gerald Dräger, Mikail Özbasi, Henry Struwe, Maik Wildhagen, Mehdi D Davari, Sascha Beutel, Andreas Kirschning
Sesquiterpene Cyclase BcBOT2 Promotes the Unprecedented Wagner-Meerwein Rearrangement of the Methoxy Group. Journal of the American Chemical Society 146 (26) (2024)
Alexander-Maurice Illig, Niklas E Siedhoff, Mehdi D Davari, Ulrich Schwaneberg
Evolutionary Probability and Stacked Regressions Enable Data-Driven Protein Engineering with Minimized Experimental Effort. Journal of chemical information and modeling 64 (16) (2024)
Malte Moeller, Dipendu Dhar, Gerald Dräger, Mikail Özbasi, Henry Struwe, Maik Wildhagen, Mehdi D Davari, Sascha Beutel, Andreas Kirschning
Sesquiterpene Cyclase BcBOT2 Promotes the Unprecedented Wagner-Meerwein Rearrangement of the Methoxy Group. Journal of the American Chemical Society (2024)
Montserrat Goles, Anamaria Sanchez-Daza, Gabriel Cabas-Mora, Lindybeth Sarmiento-Varón, Julieta Haydee Sepúlveda Yáñez, Hoda Anvari-Kazemabad, Mehdi D Davari, Roberto Uribe-Paredes, Alvaro Olivera-Nappa, Marcelo A Navarrete, David Medina-Ortiz
Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides. Briefings in bioinformatics 25 (4) (2024)
Montserrat Goles, Anamaria Sanchez-Daza, Gabriel Cabas-Mora, Lindybeth Sarmiento-Varón, Julieta Haydee Sepúlveda Yáñez, Hoda Anvari-Kazemabad, Mehdi D Davari, Roberto Uribe-Paredes, Alvaro Olivera-Nappa, Marcelo A Navarrete, David Medina-Ortiz
Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides. Briefings in bioinformatics 25 (4) (2024)
Malte Moeller, Dipendu Dhar, Gerald Dräger, Mikail Özbasi, Henry Struwe, Maik Wildhagen, Mehdi D Davari, Sascha Beutel, Andreas Kirschning
Sesquiterpene Cyclase BcBOT2 Promotes the Unprecedented Wagner-Meerwein Rearrangement of the Methoxy Group. Journal of the American Chemical Society 146 (26) (2024)
Malte Moeller, Dipendu Dhar, Gerald Dräger, Mikail Özbasi, Henry Struwe, Maik Wildhagen, Mehdi D Davari, Sascha Beutel, Andreas Kirschning
Sesquiterpene Cyclase BcBOT2 Promotes the Unprecedented Wagner-Meerwein Rearrangement of the Methoxy Group. Journal of the American Chemical Society 146 (26) (2024)
Stefanie Hemmer, Niklas Erik Siedhoff, Sophia Werner, Gizem Ölçücü, Ulrich Schwaneberg, Karl-Erich Jaeger, Mehdi D Davari, Ulrich Krauss
Machine Learning-Assisted Engineering of Light, Oxygen, Voltage Photoreceptor Adduct Lifetime. JACS Au 3 (12) (2023)
Karen E Rodríguez-Núñez, Alejandra Cortés-Monroy, Marcela Serey, Yunus Ensari, Mehdi D Davari, Claudia Bernal, Ronny Martinez
Modulating Substrate Specificity of Rhizobium sp. Histamine Dehydrogenase through Protein Engineering for Food Quality Applications. Molecules (Basel, Switzerland) 28 (9) (2023)
Ramona B J Ihlenburg, David Petracek, Paul Schrank, Mehdi D Davari, Andreas Taubert, Dirk Rothenstein
Identification of the First Sulfobetaine Hydrogel-Binding Peptides via Phage Display Assay. Macromolecular rapid communications (2023)
Stefanie Hemmer, Niklas Erik Siedhoff, Sophia Werner, Gizem Ölçücü, Ulrich Schwaneberg, Karl-Erich Jaeger, Mehdi D Davari, Ulrich Krauss
Machine Learning-Assisted Engineering of Light, Oxygen, Voltage Photoreceptor Adduct Lifetime. JACS Au 3 (12) (2023)
Yen T H Lam, Jana Hoppe, Quang N Dang, Andrea Porzel, Alena Soboleva, Wolfgang Brandt, Robert Rennert, Hidayat Hussain, Mehdi D Davari, Ludger A A Wessjohann, Norbert Arnold
Purpurascenines A-C, Azepino-Indole Alkaloids from Cortinarius purpurascens : Isolation, Biosynthesis, and Activity Studies on the 5-HT 2A Receptor. Journal of natural products (2023)
Karen E Rodríguez-Núñez, Alejandra Cortés-Monroy, Marcela Serey, Yunus Ensari, Mehdi D Davari, Claudia Bernal, Ronny Martinez
Modulating Substrate Specificity of Rhizobium sp. Histamine Dehydrogenase through Protein Engineering for Food Quality Applications. Molecules (Basel, Switzerland) 28 (9) (2023)
Stefanie Hemmer, Niklas Erik Siedhoff, Sophia Werner, Gizem Ölçücü, Ulrich Schwaneberg, Karl-Erich Jaeger, Mehdi D Davari, Ulrich Krauss
Machine Learning-Assisted Engineering of Light, Oxygen, Voltage Photoreceptor Adduct Lifetime. JACS Au 3 (12) (2023)
Zohreh N Pourhassan, Haiyang Cui, Neele Muckhoff, Mehdi D Davari, Sander H J Smits, Ulrich Schwaneberg, Lutz Schmitt
A step forward to the optimized HlyA type 1 secretion system through directed evolution. Applied microbiology and biotechnology (2023)
Benjamin Weigel, Jeanette Ludwig, Roman A Weber, Steve Ludwig, Claudia Lennicke, Paul Schrank, Mehdi D Davari, Mohamed Nagia, Ludger A A Wessjohann
Heterocyclic and Alkyne Terpenoids by Terpene Synthase-Mediated Biotransformation of Non-Natural Prenyl Diphosphates: Access to New Fragrances and Probes. Chembiochem : a European journal of chemical biology 23 (21) (2022)
Eerappa Rajakumara, Dubey Saniya, Priyanka Bajaj, Rajanna Rajeshwari, Jyotsnendu Giri, Mehdi D Davari
Hijacking Chemical Reactions of P450 Enzymes for Altered Chemical Reactions and Asymmetric Synthesis. International journal of molecular sciences 24 (1) (2022)
Eerappa Rajakumara, Dubey Saniya, Priyanka Bajaj, Rajanna Rajeshwari, Jyotsnendu Giri, Mehdi D Davari
Hijacking Chemical Reactions of P450 Enzymes for Altered Chemical Reactions and Asymmetric Synthesis. International journal of molecular sciences 24 (1) (2022)
Eerappa Rajakumara, Suman Abhishek, Kulhar Nitin, Dubey Saniya, Priyanka Bajaj, Ulrich Schwaneberg, Mehdi D Davari
Structure and Cooperativity in Substrate-Enzyme Interactions: Perspectives on Enzyme Engineering and Inhibitor Design. ACS chemical biology 17 (2) (2022)
Eerappa Rajakumara, Dubey Saniya, Priyanka Bajaj, Rajanna Rajeshwari, Jyotsnendu Giri, Mehdi D Davari
Hijacking Chemical Reactions of P450 Enzymes for Altered Chemical Reactions and Asymmetric Synthesis. International journal of molecular sciences 24 (1) (2022)
Haiyang Cui, Markus Vedder, Lingling Zhang, Karl-Erich Jaeger, Ulrich Schwaneberg, Mehdi D Davari
Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents. ChemSusChem 15 (9) (2022)
Shuaiqi Meng, Yu Ji, Luo Liu, Mehdi D Davari, Ulrich Schwaneberg
Modulating the Coupling Efficiency of P450 BM3 by Controlling Water Diffusion through Access Tunnel Engineering. ChemSusChem 15 (9) (2022)
Stefanie Brands, Jarno G Sikkens, Mehdi D Davari, Hannah Ursula Clara Brass, Andreas Sebastian Klein, Jörg Pietruszka, Anna Joëlle Ruff, Ulrich Schwaneberg
Understanding substrate binding and the role of gatekeeping residues in PigC access tunnels. Chemical communications (Cambridge, England) 57 (21) (2021)
Haiyang Cui, Karl-Erich Jaeger, Mehdi D Davari, Ulrich Schwaneberg
CompassR Yields Highly Organic-Solvent-Tolerant Enzymes through Recombination of Compatible Substitutions. Chemistry (Weinheim an der Bergstrasse, Germany) 27 (8) (2021)
Subrata Pramanik, Margarita V Semenova, Aleksandra M Rozhkova, Ivan N Zorov, Olga Korotkova, Arkady P Sinitsyn, Mehdi D Davari
An engineered cellobiohydrolase I for sustainable degradation of lignocellulosic biomass. Biotechnology and bioengineering 118 (10) (2021)
Philipp Moritz Fricke, Martha Lürkens, Max Hünnefeld, Christiane K Sonntag, Michael Bott, Mehdi D Davari, Tino Polen
Highly tunable TetR-dependent target gene expression in the acetic acid bacterium Gluconobacter oxydans. Applied microbiology and biotechnology 105 (18) (2021)
Niklas E Siedhoff, Alexander-Maurice Illig, Ulrich Schwaneberg, Mehdi D Davari
PyPEF-An Integrated Framework for Data-Driven Protein Engineering. Journal of chemical information and modeling 61 (7) (2021)
Haiyang Cui, Lobna Eltoukhy, Lingling Zhang, Ulrich Markel, Karl-Erich Jaeger, Mehdi D Davari, Ulrich Schwaneberg
Less Unfavorable Salt Bridges on the Enzyme Surface Result in More Organic Cosolvent Resistance. Angewandte Chemie (International ed. in English) 60 (20) (2021)
Maximilian Nöth, Larissa Hussmann, Thomke Belthle, Islam El-Awaad, Mehdi D Davari, Felix Jakob, Andrij Pich, Ulrich Schwaneberg
MicroGelzymes: pH-Independent Immobilization of Cytochrome P450 BM3 in Microgels. Biomacromolecules 21 (12) (2020)
Francisca Contreras, Subrata Pramanik, Aleksandra M Rozhkova, Ivan N Zorov, Olga Korotkova, Arkady P Sinitsyn, Ulrich Schwaneberg, Mehdi D Davari
Engineering Robust Cellulases for Tailored Lignocellulosic Degradation Cocktails. International journal of molecular sciences 21 (5) (2020)
Ronny Martínez, Claudia Bernal, Rodrigo Álvarez, Christopher Concha, Fernando Araya, Ricardo Cabrera, Gaurao V Dhoke, Mehdi D Davari
Deletion and Randomization of Structurally Variable Regions in B. subtilis Lipase A (BSLA) Alter Its Stability and Hydrolytic Performance Against Long Chain Fatty Acid Esters. International journal of molecular sciences 21 (6) (2020)
Andreas Maximilian Stadler, Judith Schneidewind, Michaela Zamponi, Esther Knieps-Grünhagen, Samira Gholami, Ulrich Schwaneberg, Ivan Rivalta, Marco Garavelli, Mehdi D Davari, Karl-Erich Jaeger, Ulrich Krauss
Ternary Complex Formation and Photoactivation of a Photoenzyme Results in Altered Protein Dynamics. The journal of physical chemistry. B 123 (34) (2019)
Haiyang Cui, Hao Cao, Haiying Cai, Karl-Erich Jaeger, Mehdi D Davari, Ulrich Schwaneberg
Computer-Assisted Recombination (CompassR) Teaches us How to Recombine Beneficial Substitutions from Directed Evolution Campaigns. Chemistry (Weinheim an der Bergstrasse, Germany) 26 (3) (2019)
Gustavo de Almeida Santos, Gaurao V Dhoke, Mehdi D Davari, Anna Joëlle Ruff, Ulrich Schwaneberg
Directed Evolution of P450 BM3 towards Functionalization of Aromatic O-Heterocycles. International journal of molecular sciences 20 (13) (2019)
Alexander R Grimm, Daniel F Sauer, Tayebeh Mirzaei Garakani, Kristin Rübsam, Tino Polen, Mehdi D Davari, Felix Jakob, Johannes Schiffels, Jun Okuda, Ulrich Schwaneberg
Anchor Peptide-Mediated Surface Immobilization of a Grubbs-Hoveyda-Type Catalyst for Ring-Opening Metathesis Polymerization. Bioconjugate chemistry 30 (3) (2019)
Samira Gholami, Artur Nenov, Ivan Rivalta, Marco Bocola, A Khalegh Bordbar, Ulrich Schwaneberg, Mehdi D Davari, Marco Garavelli
Theoretical Model of the Protochlorophyllide Oxidoreductase from a Hierarchy of Protocols. The journal of physical chemistry. B 122 (31) (2018)
Martin J Thiele, Mehdi D Davari, Isabell Hofmann, Melanie König, Carlos G Lopez, Ljubica Vojcic, Walter Richtering, Ulrich Schwaneberg, Larisa A Tsarkova
Enzyme-Compatible Dynamic Nanoreactors from Electrostatically Bridged Like-Charged Surfactants and Polyelectrolytes. Angewandte Chemie (International ed. in English) 57 (30) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Mehdi D Davari