Peter W Rose

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2014-2022
Publications (10 Years): 9

Top Venues

PLoS computational biology

PloS one

Nucleic acids research

Journal of computational chemistry

University of California San Diego

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego Jan 01 2017

United States

Director, Structural Bioinformatics Laboratory :: San Diego Supercomputer Center

University of California San Diego Dec 31 2007

United States

Site Head, RCSB Protein Data Bank West :: San Diego Supercomputer Center

Publications

Daniel K Gehlhaar, Brock A Luty, Philip P Cheung, Andy H Litman, Robert M Owen, Peter W Rose
The Pfizer Crystal Structure Database: An essential tool for structure-based design at Pfizer. Journal of computational chemistry 43 (15) (2022)
Faryad Sahneh, Meghan A Balk, Marina Kisley, Chi-Kwan Chan, Mercury Fox, Brian Nord, Eric Lyons, Tyson L Swetnam, Daniela Huppenkothen, Will Sutherland, Ramona L Walls, Daven P Quinn, Tonantzin Tarin, David Shaner LeBauer, David Ribes, Dunbar P Birnie, Carol Lushbough, Eric Carr, Grey Nearing, Jeremy Fischer, Kevin Tyle, Luis Carrasco, Meagan Lang, Peter W Rose, Richard R Rushforth, Samapriya Roy, Thomas Matheson, Tina Lee, C Titus Brown, Tracy K Teal, Monica Papeș, Stephen Kobourov, Nirav Merchant
Ten simple rules to cultivate transdisciplinary collaboration in data science. PLoS computational biology 17 (5) (2021)
Aleix Lafita, Spencer E Bliven, Andreas Prlić, Dmytro Guzenko, Peter W Rose, Anthony R Bradley, Paolo Pavan, Douglas Myers-Turnbull, Yana Valasatava, Michael Heuer, Matthew R Larson, Stephen K Burley, Jose M Duarte
BioJava 5: A community driven open-source bioinformatics library. PLoS computational biology 15 (2) (2019)
Adam Rule, Amanda Birmingham, Cristal Zuñiga, Ilkay Altintas, Shih-Cheng Huang, Rob Knight, Niema Moshiri, Mai H Nguyen, Sara Brin Rosenthal, Fernando Pérez, Peter W Rose
Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks. PLoS computational biology 15 (7) (2019)
Spencer E Bliven, Aleix Lafita, Peter W Rose, Guido Capitani, Andreas Prlić, Philip E Bourne
Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm. PLoS computational biology 15 (4) (2019)
Selcuk Korkmaz, Jose M Duarte, Andreas Prlić, Dincer Goksuluk, Gokmen Zararsiz, Osman Saracbasi, Stephen K Burley, Peter W Rose
Investigation of protein quaternary structure via stoichiometry and symmetry information. PloS one 13 (6) (2018)
Anthony R Bradley, Alexander S Rose, Antonín Pavelka, Yana Valasatava, Jose M Duarte, Andreas Prlić, Peter W Rose
MMTF-An efficient file format for the transmission, visualization, and analysis of macromolecular structures. PLoS computational biology 13 (6) (2017)
Yana Valasatava, Anthony R Bradley, Alexander S Rose, Jose M Duarte, Andreas Prlić, Peter W Rose
Towards an efficient compression of 3D coordinates of macromolecular structures. PloS one 12 (3) (2017)
Peter W Rose, Andreas Prlić, Ali Altunkaya, Chunxiao Bi, Anthony R Bradley, Cole H Christie, Luigi Di Costanzo, Jose M Duarte, Shuchismita Dutta, Zukang Feng, Rachel Kramer Green, David S Goodsell, Brian Hudson, Tara Kalro, Robert Lowe, Ezra Peisach, Christopher Randle, Chenghua Shao, Yi-Ping Tao, Yana Valasatava, Maria Voigt, John D Westbrook, Jesse Woo, Huangwang Yang, Jasmine Y Young, Christine Zardecki, Helen M Berman, Stephen K Burley
The RCSB protein data bank: integrative view of protein, gene and 3D structural information. Nucleic acids research 45 (D1) (2016)
Peter W Rose, Andreas Prlić, Chunxiao Bi, Wolfgang F Bluhm, Cole H Christie, Shuchismita Dutta, Rachel Kramer Green, David S Goodsell, John D Westbrook, Jesse Woo, Jasmine Young, Christine Zardecki, Helen M Berman, Philip E Bourne, Stephen K Burley
The RCSB Protein Data Bank: views of structural biology for basic and applied research and education. Nucleic acids research 43 (Database issue) (2014)

Peter W Rose

Publication Activity (10 Years)

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