Sharon Aviran

Publication Activity (10 Years)

Years Active: 2018-2021
Publications (10 Years): 10

Top Topics

Machine Learning

Molecular Dynamics Simulations

Top Venues

Nature communications

NAR genomics and bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Pierce E Radecki, Rahul Uppuluri, Sharon Aviran
Rapid structure-function insights via hairpin-centric analysis of big RNA structure probing datasets. NAR genomics and bioinformatics 3 (3) (2021)
Pierce E Radecki, Rahul Uppuluri, Kaustubh Deshpande, Sharon Aviran
Accurate detection of RNA stem-loops in structurome data reveals widespread association with protein binding sites. RNA biology (2021)
P Daniela Garcia, Robert W Leach, Gable M Wadsworth, Krishna Choudhary, Hua Li, Sharon Aviran, Harold D Kim, Virginia A Zakian
Stability and nuclear localization of yeast telomerase depend on protein components of RNase P/MRP. Nature communications 11 (1) (2020)
Krishna Choudhary, Yu-Hsuan Lai, Elizabeth J Tran, Sharon Aviran
dStruct: identifying differentially reactive regions from RNA structurome profiling data. Genome biology 20 (1) (2019)
Yu-Hsuan Lai, Krishna Choudhary, Sara C Cloutier, Zheng Xing, Sharon Aviran, Elizabeth J Tran
Genome-Wide Discovery of DEAD-Box RNA Helicase Targets Reveals RNA Structural Remodeling in Transcription Termination. Genetics 212 (1) (2019)
Sana Vaziri, Patrice Koehl, Sharon Aviran
Extracting information from RNA SHAPE data: Kalman filtering approach. PloS one 13 (11) (2018)
Hua Li, Sharon Aviran
Statistical modeling of RNA structure profiling experiments enables parsimonious reconstruction of structure landscapes. Nature communications 9 (1) (2018)
Pierce Radecki, Mirko Ledda, Sharon Aviran
Automated Recognition of RNA Structure Motifs by Their SHAPE Data Signatures. Genes 9 (6) (2018)
Mirko Ledda, Sharon Aviran
PATTERNA: transcriptome-wide search for functional RNA elements via structural data signatures. Genome biology 19 (1) (2018)
Hua Li, Sharon Aviran
Publisher Correction: Statistical modeling of RNA structure profiling experiments enables parsimonious reconstruction of structure landscapes. Nature communications 9 (1) (2018)