Shinji Saito

ResearcherID Researcher Name Resolver ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 23

Top Venues

The journal of physical chemistry. B

The Journal of chemical physics

Journal of chemical theory and computation

Physical chemistry chemical physics : PCCP

分子科学研究所/Institute for Molecular Science

Kyoto University (MSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

分子科学研究所/Institute for Molecular Science Oct 01 2005

Japan

教授/Professor :: 理論・計算分子科学研究領域　理論分子科学第一研究部門/Division of Theoretical Molecular Science I, Department of Theoretical and Computational Molecular Science

Nagoya University Apr 01 1998 - Sep 30 2005

Japan

Associate Professor

Nagoya University Apr 01 1994 - Mar 31 1998

Japan

Assistant Professot

Institute for Molecular Science Apr 01 1990 - Mar 30 1994

Japan

Technical Associate

Education History

Kyoto University Apr 01 1988 - Mar 30 1990

Japan

MSC :: Division of Molecular Engineering

Publications

Ravi Malik, Shinji Saito, Amalendu Chandra
Effect of counterions on the structure and dynamics of water near a negatively charged surfactant: a theoretical vibrational sum frequency generation study. Physical chemistry chemical physics : PCCP 26 (24) (2024)
Shin-Ichi Koda, Shinji Saito
Flat-Bottom Elastic Network Model for Generating Improved Plausible Reaction Paths. Journal of chemical theory and computation (2024)
Shin-Ichi Koda, Shinji Saito
Locating Transition States by Variational Reaction Path Optimization with an Energy-Derivative-Free Objective Function. Journal of chemical theory and computation (2024)
Shin-Ichi Koda, Shinji Saito
Locating Transition States by Variational Reaction Path Optimization with an Energy-Derivative-Free Objective Function. Journal of chemical theory and computation 20 (7) (2024)
Ravi Malik, Shinji Saito, Amalendu Chandra
Effect of counterions on the structure and dynamics of water near a negatively charged surfactant: a theoretical vibrational sum frequency generation study. Physical chemistry chemical physics : PCCP (2024)
Junichi Ono, Yoshihiro Matsumura, Toshifumi Mori, Shinji Saito
Conformational Dynamics in Proteins: Entangled Slow Fluctuations and Nonequilibrium Reaction Events. The journal of physical chemistry. B 128 (1) (2023)
Junichi Ono, Yoshihiro Matsumura, Toshifumi Mori, Shinji Saito
Conformational Dynamics in Proteins: Entangled Slow Fluctuations and Nonequilibrium Reaction Events. The journal of physical chemistry. B 128 (1) (2023)
Taichi Inagaki, Miho Hatanaka, Shinji Saito
Anisotropic and Finite Effects on Intermolecular Vibration and Relaxation Dynamics: Low-Frequency Raman Spectroscopy of Water Film and Droplet on Graphene by Molecular Dynamics Simulations. The journal of physical chemistry. B (2023)
Junichi Ono, Yoshihiro Matsumura, Toshifumi Mori, Shinji Saito
Conformational Dynamics in Proteins: Entangled Slow Fluctuations and Nonequilibrium Reaction Events. The journal of physical chemistry. B (2023)
Junichi Ono, Yoshihiro Matsumura, Toshifumi Mori, Shinji Saito
Conformational Dynamics in Proteins: Entangled Slow Fluctuations and Nonequilibrium Reaction Events. The journal of physical chemistry. B 128 (1) (2023)
Yoshihiko Furuike, Atsushi Mukaiyama, Shin-Ichi Koda, Damien Simon, Dongyan Ouyang, Kumiko Ito-Miwa, Shinji Saito, Eiki Yamashita, Taeko Nishiwaki-Ohkawa, Kazuki Terauchi, Takao Kondo, Shuji Akiyama
Regulation mechanisms of the dual ATPase in KaiC. Proceedings of the National Academy of Sciences of the United States of America 119 (19) (2022)
Shin-Ichi Koda, Shinji Saito
Multimeric structure enables the acceleration of KaiB-KaiC complex formation induced by ADP/ATP exchange inhibition. PLoS computational biology 18 (3) (2022)
Toshifumi Mori, Shinji Saito
Molecular Insights into the Intrinsic Dynamics and Their Roles During Catalysis in Pin1 Peptidyl-prolyl Isomerase. The journal of physical chemistry. B 126 (28) (2022)
Yoshihiro Matsumura, Shinji Saito
Microscopic insights into dynamic disorder in the isomerization dynamics of the protein BPTI. The Journal of chemical physics 154 (22) (2021)
Toshifumi Mori, Shinji Saito
Dissecting the Dynamics during Enzyme Catalysis: A Case Study of Pin1 Peptidyl-Prolyl Isomerase. Journal of chemical theory and computation 16 (5) (2020)
Norifumi Moritsugu, Takafumi Nara, Shin-Ichi Koda, Keisuke Tominaga, Shinji Saito
Molecular Mechanism of Acceleration and Retardation of Collective Orientation Relaxation of Water Molecules in Aqueous Solutions. The journal of physical chemistry. B 124 (51) (2020)
Carlos R Baiz, Bartosz Błasiak, Jens Bredenbeck, Minhaeng Cho, Jun-Ho Choi, Steven A Corcelli, Arend G Dijkstra, Chi-Jui Feng, Sean Garrett-Roe, Nien-Hui Ge, Magnus W D Hanson-Heine, Jonathan D Hirst, Thomas la Cour Jansen, Kijeong Kwac, Kevin J Kubarych, Casey H Londergan, Hiroaki Maekawa, Mike Reppert, Shinji Saito, Santanu Roy, James L Skinner, Gerhard Stock, John E Straub, Megan C Thielges, Keisuke Tominaga, Andrei Tokmakoff, Hajime Torii, Lu Wang, Lauren J Webb, Martin T Zanni
Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction. Chemical reviews 120 (15) (2020)
Shinji Saito, Biman Bagchi
Thermodynamic picture of vitrification of water through complex specific heat and entropy: A journey through "no man's land". The Journal of chemical physics 150 (5) (2019)
Shinji Saito, Masahiro Higashi, Graham R Fleming
Correction to "Site-Dependent Fluctuations Optimize Electronic Energy Transfer in the Fenna-Matthews-Olson Protein". The journal of physical chemistry. B 123 (51) (2019)
Shinji Saito, Masahiro Higashi, Graham R Fleming
Site-Dependent Fluctuations Optimize Electronic Energy Transfer in the Fenna-Matthews-Olson Protein. The journal of physical chemistry. B 123 (46) (2019)
Thomas la Cour Jansen, Shinji Saito, Jonggu Jeon, Minhaeng Cho
Theory of coherent two-dimensional vibrational spectroscopy. The Journal of chemical physics 150 (10) (2019)
Shinji Saito, Biman Bagchi, Iwao Ohmine
Crucial role of fragmented and isolated defects in persistent relaxation of deeply supercooled water. The Journal of chemical physics 149 (12) (2018)
Keiichiro Shiraga, Koichiro Tanaka, Takashi Arikawa, Shinji Saito, Yuichi Ogawa
Reconsideration of the relaxational and vibrational line shapes of liquid water based on ultrabroadband dielectric spectroscopy. Physical chemistry chemical physics : PCCP 20 (41) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Shinji Saito