Somayyeh Koohi

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 12

Top Topics

Respiratory Syndrome Coronavirus

Top Venues

Communications biology

PLoS computational biology

Journal of biophotonics

This page only lists publications with an associated author ORCID identifier.

Publications

Saeedeh Akbari Rokn Abadi, Amirhossein Mohammadi, Somayyeh Koohi
PC-mer: An Ultra-fast memory-efficient tool for metagenomics profiling and classification. PloS one 19 (8) (2024)
Saeedeh Akbari Rokn Abadi, Amirhossein Mohammadi, Somayyeh Koohi
PC-mer: An Ultra-fast memory-efficient tool for metagenomics profiling and classification. PloS one 19 (8) (2024)
Mahmood Kalemati, Saeid Darvishi, Somayyeh Koohi
CapsNet-MHC predicts peptide-MHC class I binding based on capsule neural networks. Communications biology 6 (1) (2023)
Saeedeh Akbari Rokn Abadi, SeyedehFatemeh Tabatabaei, Somayyeh Koohi
KDeep: a new memory-efficient data extraction method for accurately predicting DNA/RNA transcription factor binding sites. Journal of translational medicine 21 (1) (2023)
Mahmood Kalemati, Saeid Darvishi, Somayyeh Koohi
CapsNet-MHC predicts peptide-MHC class I binding based on capsule neural networks. Communications biology 6 (1) (2023)
Mahmood Kalemati, Saeid Darvishi, Somayyeh Koohi
CapsNet-MHC predicts peptide-MHC class I binding based on capsule neural networks. Communications biology 6 (1) (2023)
Mahmood Kalemati, Mojtaba Zamani Emani, Somayyeh Koohi
BiComp-DTA: Drug-target binding affinity prediction through complementary biological-related and compression-based featurization approach. PLoS computational biology 19 (3) (2023)
Mahmood Kalemati, Saeid Darvishi, Somayyeh Koohi
CapsNet-MHC predicts peptide-MHC class I binding based on capsule neural networks. Communications biology 6 (1) (2023)
Ehsan Maleki, Saeedeh Akbari Rokn Abadi, Somayyeh Koohi
HELIOS: High-speed sequence alignment in optics. PLoS computational biology 18 (11) (2022)
Saeedeh Akbari Rokn Abadi, Amirhossein Mohammadi, Somayyeh Koohi
WalkIm: Compact image-based encoding for high-performance classification of biological sequences using simple tuning-free CNNs. PloS one 17 (4) (2022)
Saeedeh Akbari Rokn Abadi, Negin Hashemi Dijujin, Somayyeh Koohi
Optical pattern generator for efficient bio-data encoding in a photonic sequence comparison architecture. PloS one 16 (1) (2021)
Ehsan Maleki, Somayyeh Koohi, Zahra Kavehvash, Alireza Mashaghi
OptCAM: An ultra-fast all-optical architecture for DNA variant discovery. Journal of biophotonics 13 (1) (2019)