Sri Rama Koti Ainavarapu

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 24

Top Venues

The journal of physical chemistry. B

Proteins

RSC advances

The FEBS journal

Tata Institute of Fundamental Research

Tata Institute of Fundamental Research (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Tata Institute of Fundamental Research

India

Associate Professor :: Department of Chemical Sciences

Tata Institute of Fundamental Research

India

Reader :: Department of Chemical Sciences

Education History

Tata Institute of Fundamental Research

India

PHD :: Deaprtment of Chemical Sciences

Publications

Debanjana Das, Sri Rama Koti Ainavarapu
Protein engineering using circular permutation - structure, function, stability, and applications. The FEBS journal (2024)
Debanjana Das, Sri Rama Koti Ainavarapu
Protein engineering using circular permutation - structure, function, stability, and applications. The FEBS journal 291 (16) (2024)
Debanjana Das, Sri Rama Koti Ainavarapu
Circular permutation at azurin's active site slows down its folding. Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry (2023)
Simran Arora, Debsankar Saha Roy, Sudipta Maiti, Sri Rama Koti Ainavarapu
Phase Separation and Aggregation of a Globular Folded Protein Small Ubiquitin-like Modifier 1 (SUMO1). The journal of physical chemistry letters (2023)
Tathagata Nandi, Sri Rama Koti Ainavarapu
Reconstruction of the Free Energy Profile for SUMO1 from Nonequilibrium Single-Molecule Pulling Experiments. The journal of physical chemistry. B 126 (11) (2022)
Tathagata Nandi, Sri Rama Koti Ainavarapu
Native Salt Bridges Are a Key Regulator of Ubiquitin's Mechanical Stability. The journal of physical chemistry. B 126 (19) (2022)
Debanjana Das, Priya Yadav, Soumyajit Mitra, Sri Rama Koti Ainavarapu
Metal-binding and circular permutation dependent thermodynamic and kinetic stability of azurin. Proteins (2022)
Mandar Bopardikar, Sri Rama Koti Ainavarapu, Ramakrishna V Hosur
Pyrogallol, Corilagin and Chebulagic acid target the "fuzzy coat" of alpha-synuclein to inhibit the fibrillization of the protein. RSC advances 12 (55) (2022)
Soumyajit Mitra, Sri Rama Koti Ainavarapu, Jyotishman Dasgupta
Long-Range Charge Delocalization Mediates the Ultrafast Ligand-to-Metal Charge Transfer Dynamics at the Cu 2+ -Active Site in Azurin. The journal of physical chemistry. B 126 (29) (2022)
Debanjana Das, Priya Yadav, Soumyajit Mitra, Sri Rama Koti Ainavarapu
Metal-binding and circular permutation-dependent thermodynamic and kinetic stability of azurin. Proteins (2022)
Debanjana Das, Priya Yadav, Soumyajit Mitra, Sri Rama Koti Ainavarapu
Metal-binding and circular permutation-dependent thermodynamic and kinetic stability of azurin. Proteins (2022)
Mandar Bopardikar, Sri Rama Koti Ainavarapu, Ramakrishna V Hosur
Pyrogallol, Corilagin and Chebulagic acid target the "fuzzy coat" of alpha-synuclein to inhibit the fibrillization of the protein. RSC advances 12 (55) (2022)
Debanjana Das, Sri Rama Koti Ainavarapu
Azurin-Derived Peptides: Comparison of Nickel- and Copper-Binding Properties. Inorganic chemistry 60 (13) (2021)
Mona Gupta, Ravindra Venkatramani, Sri Rama Koti Ainavarapu
Role of Ligand Binding Site in Modulating the Mechanical Stability of Proteins with β-Grasp Fold. The journal of physical chemistry. B 125 (4) (2021)
Sarika Tilwani, Karan Gandhi, Satya Narayan, Sri Rama Koti Ainavarapu, Sorab Nariman Dalal
Disruption of desmosome function leads to increased centrosome clustering in 14-3-3γ-knockout cells with supernumerary centrosomes. FEBS letters 595 (21) (2021)
Anirban Das, Anju Yadav, Mona Gupta, Purushotham R, Vishram L Terse, Vicky Vishvakarma, Sameer Singh, Tathagata Nandi, Arkadeep Banerjee, Kalyaneswar Mandal, Shachi Gosavi, Ranabir Das, Sri Rama Koti Ainavarapu, Sudipta Maiti
Rational Design of Protein-Specific Folding Modifiers. Journal of the American Chemical Society 143 (44) (2021)
Tathagata Nandi, Sri Rama Koti Ainavarapu
Applications of atomic force microscopy in modern biology. Emerging topics in life sciences 5 (1) (2021)
Sanjoy Paul, Sri Rama Koti Ainavarapu, Ravindra Venkatramani
Variance of Atomic Coordinates as a Dynamical Metric to Distinguish Proteins and Protein-Protein Interactions in Molecular Dynamics Simulations. The journal of physical chemistry. B 124 (21) (2020)
Mandar Bopardikar, Anusri Bhattacharya, Veera Mohana Rao Kakita, Kavitha Rachineni, Lalit C Borde, Sinjan Choudhary, Sri Rama Koti Ainavarapu, Ramakrishna V Hosur
Triphala inhibits alpha-synuclein fibrillization and their interaction study by NMR provides insights into the self-association of the protein. RSC advances 9 (49) (2019)
Sasi Divya, Satya Narayan, Sri Rama Koti Ainavarapu, Deepa Khushalani
Insight into the Excitation-Dependent Fluorescence of Carbon Dots. Chemphyschem : a European journal of chemical physics and physical chemistry 20 (7) (2019)
Tathagata Nandi, Anju Yadav, Sri Rama Koti Ainavarapu
Experimental comparison of energy landscape features of ubiquitin family proteins. Proteins 88 (3) (2019)
Shrabasti Bhattacharya, Sri Rama Koti Ainavarapu
Mechanical Softening of a Small Ubiquitin-Related Modifier Protein Due to Temperature Induced Flexibility at the Core. The journal of physical chemistry. B 122 (39) (2018)
Anju Yadav, Sanjoy Paul, Ravindra Venkatramani, Sri Rama Koti Ainavarapu
Differences in the mechanical unfolding pathways of apo- and copper-bound azurins. Scientific reports 8 (1) (2018)
Aditya Prasad Patra, Shobhona Sharma, Sri Rama Koti Ainavarapu
Force Spectroscopy of the Plasmodium falciparum Vaccine Candidate Circumsporozoite Protein Suggests a Mechanically Pliable Repeat Region. The Journal of biological chemistry 292 (6) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Sri Rama Koti Ainavarapu