Timothy Cholko

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2019-2022
Publications (10 Years): 5

Top Topics

Molecular Dynamics

Top Venues

The journal of physical chemistry. B

Physical chemistry chemical physics : PCCP

Science advances

Journal of chemical information and modeling

This page only lists publications with an associated author ORCID identifier.

Publications

Timothy Cholko, Shivansh Kaushik, Kingsley Y Wu, Ruben Montes, Chia-En A Chang
GeomBD3: Brownian Dynamics Simulation Software for Biological and Engineered Systems. Journal of chemical information and modeling 62 (10) (2022)
Yi-Chuan Li, Ti-Chun Chao, Hee Jong Kim, Timothy Cholko, Shin-Fu Chen, Guojie Li, Laura Snyder, Kotaro Nakanishi, Chia-En A Chang, Kenji Murakami, Benjamin A Garcia, Thomas G Boyer, Kuang-Lei Tsai
Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module. Science advances 7 (3) (2021)
Timothy Cholko, Chia-En A Chang
Modeling Effects of Surface Properties and Probe Density for Nanoscale Biosensor Design: A Case Study of DNA Hybridization near Surfaces. The journal of physical chemistry. B 125 (7) (2021)
Timothy Cholko, Joseph Barnum, Chia-En A Chang
Amyloid-β (Aβ42) Peptide Aggregation Rate and Mechanism on Surfaces with Widely Varied Properties: Insights from Brownian Dynamics Simulations. The journal of physical chemistry. B 124 (27) (2020)
Timothy Cholko, Shivansh Kaushik, Chia-En A Chang
Dynamics and molecular interactions of single-stranded DNA in nucleic acid biosensors with varied surface properties. Physical chemistry chemical physics : PCCP 21 (29) (2019)