Tong Liu

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 17

Top Topics

Machine Learning

Top Venues

PLoS computational biology

NAR genomics and bioinformatics

International journal of molecular sciences

This page only lists publications with an associated author ORCID identifier.

Publications

Hao Zhu, Tong Liu, Zheng Wang
C2c: Predicting Micro-C from Hi-C. Genes 15 (6) (2024)
Tong Liu, Hao Zhu, Zheng Wang
Learning Micro-C from Hi-C with diffusion models. PLoS computational biology 20 (5) (2024)
Tong Liu, Hao Zhu, Zheng Wang
Learning Micro-C from Hi-C with diffusion models. PLoS computational biology 20 (5) (2024)
Chenguang Zhao, Tong Liu, Zheng Wang
PANDA-3D: protein function prediction based on AlphaFold models. NAR genomics and bioinformatics 6 (3) (2024)
Tong Liu, Hao Zhu, Zheng Wang
Learning Micro-C from Hi-C with diffusion models. PLoS computational biology 20 (5) (2024)
Andrew Jordan Siciliano, Chenguang Zhao, Tong Liu, Zheng Wang
EGG: Accuracy Estimation of Individual Multimeric Protein Models Using Deep Energy-Based Models and Graph Neural Networks. International journal of molecular sciences 25 (11) (2024)
Andrew Jordan Siciliano, Chenguang Zhao, Tong Liu, Zheng Wang
EGG: Accuracy Estimation of Individual Multimeric Protein Models Using Deep Energy-Based Models and Graph Neural Networks. International journal of molecular sciences 25 (11) (2024)
Chenguang Zhao, Tong Liu, Zheng Wang
PANDA-3D: protein function prediction based on AlphaFold models. NAR genomics and bioinformatics 6 (3) (2024)
Hao Zhu, Tong Liu, Zheng Wang
C2c: Predicting Micro-C from Hi-C. Genes 15 (6) (2024)
Tong Liu, Hao Zhu, Zheng Wang
Learning Micro-C from Hi-C with diffusion models. PLoS computational biology 20 (5) (2024)
Chenguang Zhao, Tong Liu, Zheng Wang
PANDA-3D: protein function prediction based on AlphaFold models. NAR genomics and bioinformatics 6 (3) (2024)
Hao Zhu, Tong Liu, Zheng Wang
C2c: Predicting Micro-C from Hi-C. Genes 15 (6) (2024)
Andrew Jordan Siciliano, Chenguang Zhao, Tong Liu, Zheng Wang
EGG: Accuracy Estimation of Individual Multimeric Protein Models Using Deep Energy-Based Models and Graph Neural Networks. International journal of molecular sciences 25 (11) (2024)
Tong Liu, Zheng Wang
DeepChIA-PET: Accurately predicting ChIA-PET from Hi-C and ChIP-seq with deep dilated networks. PLoS computational biology 19 (7) (2023)
Tong Liu, Zheng Wang
scHiCEmbed: Bin-Specific Embeddings of Single-Cell Hi-C Data Using Graph Auto-Encoders. Genes 13 (6) (2022)
Chenguang Zhao, Tong Liu, Zheng Wang
Functional Similarities of Protein-Coding Genes in Topologically Associating Domains and Spatially-Proximate Genomic Regions. Genes 13 (3) (2022)
Tong Liu, Zheng Wang
HiCNN2: Enhancing the Resolution of Hi-C Data Using an Ensemble of Convolutional Neural Networks. Genes 10 (11) (2019)