Tong Zhu

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Binding Protein

Molecular Dynamics

Top Venues

Physical chemistry chemical physics : PCCP

The journal of physical chemistry. A

Organic letters

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

Yaqi Deng, Zongjing Hu, Jian Xue, Jiabin Yin, Tong Zhu, Shunying Liu
Visible-Light-Promoted α-C(sp 3 )-H Amination of Ethers with Azoles and Amides. Organic letters (2024)
Jiajia Sun, Wei Lai, Jiayan Zhao, Jinhong Xue, Tong Zhu, Mingshu Xiao, Tiantian Man, Ying Wan, Hao Pei, Li Li
Rapid Identification of Drug Mechanisms with Deep Learning-Based Multichannel Surface-Enhanced Raman Spectroscopy. ACS sensors 9 (8) (2024)
Jiayi Wei, Yueyang Sun, Heming Wang, Tong Zhu, Li Li, Ying Zhou, Quan Liu, Zhen Dai, Wenjuan Li, Taihua Yang, Bingmei Wang, Chang-Feng Zhu, Xi-Zhong Shen, Qunyan Yao, Guangqi Song, Yicheng Zhao, Hao Pei
Designer cellular spheroids with DNA origami for drug screening. Science advances 10 (29) (2024)
Haoqing Fu, Mengna Zhang, Jiancai Leng, Wei Hu, Tong Zhu, Yujin Zhang
Predicting Two-Photon Absorption Spectra of Octupolar Molecules: A Deep-Learning Approach Based Exclusively on Molecular Structures. The journal of physical chemistry. A 128 (2) (2024)
Jiajia Sun, Wei Lai, Jiayan Zhao, Jinhong Xue, Tong Zhu, Mingshu Xiao, Tiantian Man, Ying Wan, Hao Pei, Li Li
Rapid Identification of Drug Mechanisms with Deep Learning-Based Multichannel Surface-Enhanced Raman Spectroscopy. ACS sensors (2024)
Yaqi Deng, Zongjing Hu, Jian Xue, Jiabin Yin, Tong Zhu, Shunying Liu
Visible-Light-Promoted α-C(sp 3 )-H Amination of Ethers with Azoles and Amides. Organic letters 26 (4) (2024)
Haoqing Fu, Mengna Zhang, Jiancai Leng, Wei Hu, Tong Zhu, Yujin Zhang
Predicting Two-Photon Absorption Spectra of Octupolar Molecules: A Deep-Learning Approach Based Exclusively on Molecular Structures. The journal of physical chemistry. A (2024)
Jiayi Wei, Yueyang Sun, Heming Wang, Tong Zhu, Li Li, Ying Zhou, Quan Liu, Zhen Dai, Wenjuan Li, Taihua Yang, Bingmei Wang, Chang-Feng Zhu, Xi-Zhong Shen, Qunyan Yao, Guangqi Song, Yicheng Zhao, Hao Pei
Designer cellular spheroids with DNA origami for drug screening. Science advances 10 (29) (2024)
Liqun Cao, Jinzhe Zeng, Bo Wang, Tong Zhu, John Zenghui Zhang
Ab initio neural network MD simulation of thermal decomposition of a high energy material CL-20/TNT. Physical chemistry chemical physics : PCCP 24 (19) (2022)
Ya Gao, Bo Wang, Shiyu Hu, Tong Zhu, John Z H Zhang
An efficient method to predict protein thermostability in alanine mutation. Physical chemistry chemical physics : PCCP (2022)
Mingyuan Xu, Tong Zhu, John Zenghui Zhang
Automated Construction of Neural Network Potential Energy Surface: The Enhanced Self-Organizing Incremental Neural Network Deep Potential Method. Journal of chemical information and modeling 61 (11) (2021)
Zhiwen Liu, Fanglong Zhao, Boyang Zhao, Jie Yang, Joseph D Ferrara, Banumathi Sankaran, B V Venkataram Prasad, Biki Bapi Kundu, George N Philips, Yang Gao, Liya Hu, Tong Zhu, Xue Gao
Structural basis of the stereoselective formation of the spirooxindole ring in the biosynthesis of citrinadins. Nature communications 12 (1) (2021)
Yao Liu, Yalong Cong, Chuanxi Zhang, Bohuan Fang, Yue Pan, Qiangzi Li, Chun You, Bei Gao, John Z H Zhang, Tong Zhu, Lujia Zhang
Engineering the biomimetic cofactors of NMNH for cytochrome P450 BM3 based on binding conformation refinement. RSC advances 11 (20) (2021)
Junxiao Chen, Na Li, Xingyu Wang, Jianzhong Chen, John Z H Zhang, Tong Zhu
Molecular mechanism related to the binding of fluorophores to Mango-II revealed by multiple-replica molecular dynamics simulations. Physical chemistry chemical physics : PCCP 23 (17) (2021)
Jinzhe Zeng, Liqun Cao, Mingyuan Xu, Tong Zhu, John Zenghui Zhang
Complex reaction processes in combustion unraveled by neural network-based molecular dynamics simulation. Nature communications 11 (1) (2020)
Jianzhong Chen, Laixue Pang, Wei Wang, Lifei Wang, John Zenghui Zhang, Tong Zhu
Decoding molecular mechanism of inhibitor bindings to CDK2 using molecular dynamics simulations and binding free energy calculations. Journal of biomolecular structure & dynamics 38 (4) (2019)
Mingyuan Xu, Xiao He, Tong Zhu, John Zenghui Zhang
A Fragment Quantum Mechanical Method for Metalloproteins. Journal of chemical theory and computation 15 (2) (2019)
Jianzhong Chen, Baohua Yin, Laixue Pang, Wei Wang, John Zenghui Zhang, Tong Zhu
Binding modes and conformational changes of FK506-binding protein 51 induced by inhibitor bindings: insight into molecular mechanisms based on multiple simulation technologies. Journal of biomolecular structure & dynamics 38 (7) (2019)
Mingyuan Xu, Tong Zhu, John Zenghui Zhang
Molecular Dynamics Simulation of Zinc Ion in Water with an ab Initio Based Neural Network Potential. The journal of physical chemistry. A 123 (30) (2019)
Qinglai Yang, Zhubin Hu, Shoujun Zhu, Rui Ma, Huilong Ma, Zhuoran Ma, Hao Wan, Tong Zhu, Zhengyan Jiang, Weiqiang Liu, Liying Jiao, Haitao Sun, Yongye Liang, Hongjie Dai
Donor Engineering for NIR-II Molecular Fluorophores with Enhanced Fluorescent Performance. Journal of the American Chemical Society 140 (5) (2018)