Wei Vivian Li

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 38

Top Venues

mBio

Infection and immunity

Genome biology

bioRxiv : the preprint server for biology

Rutgers The State University of New Jersey

University of California Los Angeles (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Rutgers The State University of New Jersey Aug 19 2019

United States

Assistant Professor :: Biostatistics and Epidemiology

Education History

University of California Los Angeles Sep 25 2014 - Jun 14 2019

United States

PHD :: Department of Statistics

Huazhong University of Science and Technology Sep 01 2010 - Jun 25 2014

China

BSC :: Mathematics and Statistics

Publications

Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity 92 (3) (2024)
Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity (2024)
Danny Wan, Andrew Cheng, Yuxuan Wang, Guangming Zhong, Wei Vivian Li, Huizhou Fan
Analyzing RNA-Seq Data from Chlamydia with Super Broad Transcriptomic Activation: Challenges, Solutions, and Implications for Other Systems. bioRxiv : the preprint server for biology (2024)
Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity 92 (3) (2024)
Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity 92 (3) (2024)
Shan Yu, Wei Vivian Li
spVC for the detection and interpretation of spatial gene expression variation. Genome biology 25 (1) (2024)
Danny Wan, Andrew Cheng, Yuxuan Wang, Guangming Zhong, Wei Vivian Li, Huizhou Fan
Analyzing RNA-Seq Data from Chlamydia with Super Broad Transcriptomic Activation: Challenges, Solutions, and Implications for Other Systems. bioRxiv : the preprint server for biology (2024)
Shan Yu, Wei Vivian Li
spVC for the detection and interpretation of spatial gene expression variation. Genome biology 25 (1) (2024)
Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity 92 (3) (2024)
Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity 92 (3) (2024)
Danny Wan, Andrew Cheng, Yuxuan Wang, Guangming Zhong, Wei Vivian Li, Huizhou Fan
Analyzing RNA-Seq Data from Chlamydia with Super Broad Transcriptomic Activation: Challenges, Solutions, and Implications for Other Systems. bioRxiv : the preprint server for biology (2024)
Ting Li, Kun Qian, Xiang Wang, Wei Vivian Li, Hongwei Li
scBiG for representation learning of single-cell gene expression data based on bipartite graph embedding. NAR genomics and bioinformatics 6 (1) (2024)
Danny Wan, Andrew Cheng, Yuxuan Wang, Guangming Zhong, Wei Vivian Li, Huizhou Fan
Analyzing RNA-Seq Data from Chlamydia with Super Broad Transcriptomic Activation: Challenges, Solutions, and Implications for Other Systems. bioRxiv : the preprint server for biology (2024)
Shan Yu, Wei Vivian Li
spVC for the detection and interpretation of spatial gene expression variation. Genome biology 25 (1) (2024)
Ting Li, Kun Qian, Xiang Wang, Wei Vivian Li, Hongwei Li
scBiG for representation learning of single-cell gene expression data based on bipartite graph embedding. NAR genomics and bioinformatics 6 (1) (2024)
Wurihan Wurihan, Yuxuan Wang, Sydney Yeung, Yi Zou, Zhao Lai, Joseph D Fondell, Wei Vivian Li, Guangming Zhong, Huizhou Fan
Expression activation of over 70% of Chlamydia trachomatis genes during the first hour of infection. Infection and immunity 92 (3) (2024)
Shan Yu, Wei Vivian Li
spVC for the detection and interpretation of spatial gene expression variation. Genome biology 25 (1) (2024)
Ting Li, Kun Qian, Xiang Wang, Wei Vivian Li, Hongwei Li
scBiG for representation learning of single-cell gene expression data based on bipartite graph embedding. NAR genomics and bioinformatics 6 (1) (2024)
Danny Wan, Andrew Cheng, Yuxuan Wang, Guangming Zhong, Wei Vivian Li, Huizhou Fan
Analyzing RNA-Seq Data from Chlamydia with Super Broad Transcriptomic Activation: Challenges, Solutions, and Implications for Other Systems. bioRxiv : the preprint server for biology (2024)
Danny Wan, Andrew Cheng, Yuxuan Wang, Guangming Zhong, Wei Vivian Li, Huizhou Fan
Analyzing RNA-Seq Data from Chlamydia with Super Broad Transcriptomic Activation: Challenges, Solutions, and Implications for Other Systems. bioRxiv : the preprint server for biology (2024)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio 15 (1) (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. bioRxiv : the preprint server for biology (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio 15 (1) (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio 15 (1) (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio 15 (1) (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio (2023)
Bin Lu, Yuxuan Wang, Wurihan Wurihan, Andrew Cheng, Sydney Yeung, Joseph D Fondell, Zhao Lai, Danny Wan, Xiang Wu, Wei Vivian Li, Huizhou Fan
Requirement of GrgA for Chlamydia infectious progeny production, optimal growth, and efficient plasmid maintenance. mBio 15 (1) (2023)
Iyshwarya Balasubramanian, Sheila Bandyopadhyay, Juan Flores, Jared Bianchi-Smak, Xiang Lin, Haoran Liu, Shengxiang Sun, Natasha B Golovchenko, Yue Liu, Dahui Wang, Radha Patel, Ivor Joseph, Panan Suntornsaratoon, Justin Vargas, Peter Hr Green, Govind Bhagat, Stephen M Lagana, Wang Ying, Yi Zhang, Zhihan Wang, Wei Vivian Li, Sukhwinder Singh, Zhongren Zhou, George Kollias, Laura A Farr, Shannon N Moonah, Shiyan Yu, Zhi Wei, Edward M Bonder, Lanjing Zhang, Pawel R Kiela, Karen L Edelblum, Ronaldo Ferraris, Ta-Chiang Liu, Nan Gao
Infection and inflammation stimulate expansion of a CD74 + Paneth cell subset to regulate disease progression. The EMBO journal (2023)
Jiayi Liu, Anat Kreimer, Wei Vivian Li
Differential variability analysis of single-cell gene expression data. Briefings in bioinformatics (2023)
Kun Qian, Shiwei Fu, Hongwei Li, Wei Vivian Li
scINSIGHT for interpreting single-cell gene expression from biologically heterogeneous data. Genome biology 23 (1) (2022)
Kun Qian, Shiwei Fu, Hongwei Li, Wei Vivian Li
Author Correction: scINSIGHT for interpreting single-cell gene expression from biologically heterogeneous data. Genome biology 23 (1) (2022)
Kun Qian, Shiwei Fu, Hongwei Li, Wei Vivian Li
The scINSIGHT Package for Integrating Single-Cell RNA-Seq Data from Different Biological Conditions. Journal of computational biology : a journal of computational molecular cell biology 29 (11) (2022)
Wei Vivian Li
Phitest for analyzing the homogeneity of single-cell populations. Bioinformatics (Oxford, England) 38 (9) (2022)
Wei Vivian Li, Dinghai Zheng, Ruijia Wang, Bin Tian
MAAPER: model-based analysis of alternative polyadenylation using 3' end-linked reads. Genome biology 22 (1) (2021)
Wei Vivian Li, Shan Li, Xin Tong, Ling Deng, Hubing Shi, Jingyi Jessica Li
AIDE: annotation-assisted isoform discovery with high precision. Genome research 29 (12) (2019)
Wei Vivian Li, Jingyi Jessica Li
An accurate and robust imputation method scImpute for single-cell RNA-seq data. Nature communications 9 (1) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Wei Vivian Li