Xia Li

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 26

Top Topics

Transcription Factor

Dna Methylation

Top Venues

International journal of cancer

Briefings in bioinformatics

Nucleic acids research

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

Feng Li, Jingwen Wang, Mengyue Li, Xiaomeng Zhang, Yongjuan Tang, Xinyu Song, Yifang Zhang, Liying Pei, Jiaqi Liu, Chunlong Zhang, Xia Li, Yanjun Xu, Yunpeng Zhang
Identifying cell type-specific transcription factor-mediated activity immune modules reveal implications for immunotherapy and molecular classification of pan-cancer. Briefings in bioinformatics 25 (5) (2024)
Feng Li, Jingwen Wang, Mengyue Li, Xiaomeng Zhang, Yongjuan Tang, Xinyu Song, Yifang Zhang, Liying Pei, Jiaqi Liu, Chunlong Zhang, Xia Li, Yanjun Xu, Yunpeng Zhang
Identifying cell type-specific transcription factor-mediated activity immune modules reveal implications for immunotherapy and molecular classification of pan-cancer. Briefings in bioinformatics 25 (5) (2024)
Jianlong Liao, Jing Bai, Tao Pan, Haozhe Zou, Yueying Gao, Jing Guo, Qi Xu, Juan Xu, Yongsheng Li, Xia Li
Clinical and genomic characterization of mutational signatures across human cancers. International journal of cancer 152 (8) (2023)
Jianlong Liao, Jing Bai, Tao Pan, Haozhe Zou, Yueying Gao, Jing Guo, Qi Xu, Juan Xu, Yongsheng Li, Xia Li
Clinical and genomic characterization of mutational signatures across human cancers. International journal of cancer 152 (8) (2023)
Jianlong Liao, Jing Bai, Tao Pan, Haozhe Zou, Yueying Gao, Jing Guo, Qi Xu, Juan Xu, Yongsheng Li, Xia Li
Clinical and genomic characterization of mutational signatures across human cancers. International journal of cancer 152 (8) (2023)
Jianlong Liao, Jing Bai, Tao Pan, Haozhe Zou, Yueying Gao, Jing Guo, Qi Xu, Juan Xu, Yongsheng Li, Xia Li
Clinical and genomic characterization of mutational signatures across human cancers. International journal of cancer 152 (8) (2023)
Yue Gao, Shipeng Shang, Shuang Guo, Xinyue Wang, Hanxiao Zhou, Yue Sun, Jing Gan, Yakun Zhang, Xia Li, Shang-Wei Ning, Yunpeng Zhang
AgingBank: a manually curated knowledgebase and high-throughput analysis platform that provides experimentally supported multi-omics data relevant to aging in multiple species. Briefings in bioinformatics 23 (6) (2022)
Qiuyan Guo, Peng Wang, Qian Liu, Yangyang Hao, Yue Gao, Yue Qi, Rongji Xu, Hongyan Chen, Mengyu Xin, Xiaoting Wu, Rui Sun, Hui Zhi, Yunpeng Zhang, Shang-Wei Ning, Xia Li
CellTracer: a comprehensive database to dissect the causative multilevel interplay contributing to cell development trajectories. Nucleic acids research (2022)
Congxue Hu, Yingqi Xu, Feng Li, Wanqi Mi, He Yu, Xinran Wang, Xin Wen, Shuaijun Chen, Xia Li, Yanjun Xu, Yunpeng Zhang
Identifying and characterizing drug sensitivity-related lncRNA-TF-gene regulatory triplets. Briefings in bioinformatics 23 (5) (2022)
Liwen Xu, Shiwei Zhu, Yujia Lan, Min Yan, Zedong Jiang, Jiali Zhu, Gaoming Liao, Yanyan Ping, Jinyuan Xu, Bo Pang, Yunpeng Zhang, Yun Xiao, Xia Li
Revealing the contribution of somatic gene mutations to shaping tumor immune microenvironment. Briefings in bioinformatics 23 (3) (2022)
Jianlong Liao, Jing Bai, Tao Pan, Haozhe Zou, Yueying Gao, Jing Guo, Qi Xu, Juan Xu, Yongsheng Li, Xia Li
Clinical and genomic characterization of mutational signatures across human cancers. International journal of cancer (2022)
Jiaqi Chen, Zhengxin Chen, Rufei Chen, Dehua Feng, Tianyi Li, Huirui Han, Xiaoman Bi, Zhenzhen Wang, Kongning Li, Yongsheng Li, Xia Li, Limei Wang, Jin Li
HCDT: an integrated highly confident drug-target resource. Database : the journal of biological databases and curation 2022 (2022)
Jianlong Liao, Jing Bai, Tao Pan, Haozhe Zou, Yueying Gao, Jing Guo, Qi Xu, Juan Xu, Yongsheng Li, Xia Li
Clinical and genomic characterization of mutational signatures across human cancers. International journal of cancer (2022)
Yangyang Cai, Dezhong Lv, Donghao Li, Jiaqi Yin, Yingying Ma, Ya Luo, Limei Fu, Na Ding, Yongsheng Li, Zhen-Wei Pan, Xia Li, Juan Xu
IEAtlas: an atlas of HLA-presented immune epitopes derived from non-coding regions. Nucleic acids research (2022)
Xin Li, Lefan Tang, Jiaxing Deng, Xiuying Qi, Juxuan Zhang, Haitao Qi, Mengyue Li, Yixin Liu, Wenyuan Zhao, Yunyan Gu, Lishuang Qi, Xia Li
Identifying metabolic reprogramming phenotypes with glycolysis-lipid metabolism discoordination and intercellular communication for lung adenocarcinoma metastasis. Communications biology 5 (1) (2022)
Tiantongfei Jiang, Weiwei Zhou, Zhenghong Chang, Haozhe Zou, Jing Bai, Qisen Sun, Tao Pan, Juan Xu, Yongsheng Li, Xia Li
ImmReg: the regulon atlas of immune-related pathways across cancer types. Nucleic acids research 49 (21) (2022)
Tingting Shao, Yunjin Xie, Jingyi Shi, Changbo Yang, Haozhe Zou, Yongsheng Li, Juan Xu, Xia Li
Surveying lncRNA-lncRNA cooperations reveals dominant effect on tumor immunity cross cancers. Communications biology 5 (1) (2022)
Congxue Hu, Tengyue Li, Yingqi Xu, Xinxin Zhang, Feng Li, Jing Bai, Jing Chen, Wenqi Jiang, Kaiyue Yang, Qi Ou, Xia Li, Peng Wang, Yunpeng Zhang
CellMarker 2.0: an updated database of manually curated cell markers in human/mouse and web tools based on scRNA-seq data. Nucleic acids research (2022)
Dezhong Lv, Kang Xu, Changbo Yang, Yujie Liu, Ya Luo, Weiwei Zhou, Haozhe Zou, Yangyang Cai, Na Ding, Xia Li, Tingting Shao, Yongsheng Li, Juan Xu
PRES: a webserver for decoding the functional perturbations of RNA editing sites. Briefings in bioinformatics 23 (4) (2022)
Dezhong Lv, Zhenghong Chang, Yangyang Cai, Junyi Li, Liping Wang, Qiushuang Jiang, Kang Xu, Na Ding, Xia Li, Juan Xu, Yongsheng Li
TransLnc: a comprehensive resource for translatable lncRNAs extends immunopeptidome. Nucleic acids research (2021)
Xin Li, Xu Pan, Hanxiao Zhou, Peng Wang, Yue Gao, Shipeng Shang, Shuang Guo, Jie Sun, Zhiying Xiong, Shang-Wei Ning, Hui Zhi, Xia Li
Comprehensive characterization genetic regulation and chromatin landscape of enhancer-associated long non-coding RNAs and their implication in human cancer. Briefings in bioinformatics (2021)
Zhangxiang Zhao, YingYing Guo, Yaoyao Liu, Lichun Sun, Bo Chen, Chengyu Wang, Tingting Chen, Yuquan Wang, Yawei Li, Qi Dong, Liqiang Ai, Ran Wang, Yunyan Gu, Xia Li
Individualized lncRNA differential expression profile reveals heterogeneity of breast cancer. Oncogene 40 (27) (2021)
Peng Wang, Qiuyan Guo, Yue Qi, Yangyang Hao, Yue Gao, Hui Zhi, Yuanfu Zhang, Yue Sun, Yakun Zhang, Mengyu Xin, Yunpeng Zhang, Shang-Wei Ning, Xia Li
LncACTdb 3.0: an updated database of experimentally supported ceRNA interactions and personalized networks contributing to precision medicine. Nucleic acids research (2021)
Yong Zhang, Aimin Xie, Fei Quan, Xiaobo Hou, Jianlong Liao, Shiwei Zhu, Lin Pang, Xin Liang, Xiaojing Zhu, Peng Cheng, Xia Li, Yun Xiao
Identifying bifurcated paths with differential function impact in glioblastomas evolution. International journal of cancer 147 (11) (2020)
Yunpeng Zhang, Peng Wang, Xin Li, Shangwei Ning, Xia Li, Yan Cao, Steven Xi Chen
GABC: A comprehensive resource and Genome Atlas for Breast Cancer. International journal of cancer 148 (4) (2020)
Li Wang, Hongying Zhao, Yingqi Xu, Jing Li, Chunyu Deng, Yulan Deng, Jing Bai, Xia Li, Yun Xiao, Yunpeng Zhang
Systematic identification of lincRNA-based prognostic biomarkers by integrating lincRNA expression and copy number variation in lung adenocarcinoma. International journal of cancer 144 (7) (2018)