Yi Yang

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 30

Top Topics

Ultra High Performance Liquid Chromatography

Top Venues

Nature communications

NPJ biofilms and microbiomes

Analytical chemistry

Journal of proteome research

This page only lists publications with an associated author ORCID identifier.

Publications

Yu Wang, Zhi-Ying Guan, Shao-Wen Shi, Yi-Rong Jiang, Jie Zhang, Yi Yang, Qiong Wu, Jie Wu, Jian-Bo Chen, Wei-Xin Ying, Qin-Qin Xu, Qian-Xi Fan, Hui-Feng Wang, Li Zhou, Ling Wang, Jin Fang, Jian-Zhang Pan, Qun Fang
Pick-up single-cell proteomic analysis for quantifying up to 3000 proteins in a Mammalian cell. Nature communications 15 (1) (2024)
Yu Wang, Zhi-Ying Guan, Shao-Wen Shi, Yi-Rong Jiang, Jie Zhang, Yi Yang, Qiong Wu, Jie Wu, Jian-Bo Chen, Wei-Xin Ying, Qin-Qin Xu, Qian-Xi Fan, Hui-Feng Wang, Li Zhou, Ling Wang, Jin Fang, Jian-Zhang Pan, Qun Fang
Pick-up single-cell proteomic analysis for quantifying up to 3000 proteins in a Mammalian cell. Nature communications 15 (1) (2024)
Yi Yang, Qun Fang
Prediction of glycopeptide fragment mass spectra by deep learning. Nature communications 15 (1) (2024)
Yameng Dai, Yi Yang, Enhui Wu, Chengpin Shen, Liang Qiao
Deep Learning Powers Protein Identification from Precursor MS Information. Journal of proteome research (2024)
Enhui Wu, Yi Yang, Jinzhi Zhao, Jianxujie Zheng, Xiaoqing Wang, Chengpin Shen, Liang Qiao
High-Abundance Protein-Guided Hybrid Spectral Library for Data-Independent Acquisition Metaproteomics. Analytical chemistry 96 (3) (2024)
Yu Wang, Zhi-Ying Guan, Shao-Wen Shi, Yi-Rong Jiang, Jie Zhang, Yi Yang, Qiong Wu, Jie Wu, Jian-Bo Chen, Wei-Xin Ying, Qin-Qin Xu, Qian-Xi Fan, Hui-Feng Wang, Li Zhou, Ling Wang, Jin Fang, Jian-Zhang Pan, Qun Fang
Pick-up single-cell proteomic analysis for quantifying up to 3000 proteins in a Mammalian cell. Nature communications 15 (1) (2024)
Yu Wang, Zhi-Ying Guan, Shao-Wen Shi, Yi-Rong Jiang, Jie Zhang, Yi Yang, Qiong Wu, Jie Wu, Jian-Bo Chen, Wei-Xin Ying, Qin-Qin Xu, Qian-Xi Fan, Hui-Feng Wang, Li Zhou, Ling Wang, Jin Fang, Jian-Zhang Pan, Qun Fang
Pick-up single-cell proteomic analysis for quantifying up to 3000 proteins in a Mammalian cell. Nature communications 15 (1) (2024)
Yi Yang, Qun Fang
Prediction of glycopeptide fragment mass spectra by deep learning. Nature communications 15 (1) (2024)
Enhui Wu, Yi Yang, Jinzhi Zhao, Jianxujie Zheng, Xiaoqing Wang, Chengpin Shen, Liang Qiao
High-Abundance Protein-Guided Hybrid Spectral Library for Data-Independent Acquisition Metaproteomics. Analytical chemistry (2024)
Yi Yang, Qun Fang
Prediction of glycopeptide fragment mass spectra by deep learning. Nature communications 15 (1) (2024)
Enhui Wu, Yi Yang, Jinzhi Zhao, Jianxujie Zheng, Xiaoqing Wang, Chengpin Shen, Liang Qiao
High-Abundance Protein-Guided Hybrid Spectral Library for Data-Independent Acquisition Metaproteomics. Analytical chemistry 96 (3) (2024)
Enhui Wu, Yi Yang, Jinzhi Zhao, Jianxujie Zheng, Xiaoqing Wang, Chengpin Shen, Liang Qiao
High-Abundance Protein-Guided Hybrid Spectral Library for Data-Independent Acquisition Metaproteomics. Analytical chemistry 96 (3) (2024)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Jinzhi Zhao, Yi Yang, Hua Xu, Jianxujie Zheng, Chengpin Shen, Tian Chen, Tao Wang, Bing Wang, Jia Yi, Dan Zhao, Enhui Wu, Qin Qin, Li Xia, Liang Qiao
Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota. NPJ biofilms and microbiomes 9 (1) (2023)
Jinzhi Zhao, Yi Yang, Hua Xu, Jianxujie Zheng, Chengpin Shen, Tian Chen, Tao Wang, Bing Wang, Jia Yi, Dan Zhao, Enhui Wu, Qin Qin, Li Xia, Liang Qiao
Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota. NPJ biofilms and microbiomes 9 (1) (2023)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Jinzhi Zhao, Yi Yang, Hua Xu, Jianxujie Zheng, Chengpin Shen, Tian Chen, Tao Wang, Bing Wang, Jia Yi, Dan Zhao, Enhui Wu, Qin Qin, Li Xia, Liang Qiao
Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota. NPJ biofilms and microbiomes 9 (1) (2023)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Jinzhi Zhao, Yi Yang, Hua Xu, Jianxujie Zheng, Chengpin Shen, Tian Chen, Tao Wang, Bing Wang, Jia Yi, Dan Zhao, Enhui Wu, Qin Qin, Li Xia, Liang Qiao
Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota. NPJ biofilms and microbiomes 9 (1) (2023)
Yu Zong, Yuxin Wang, Yi Yang, Dan Zhao, Xiaoqing Wang, Chengpin Shen, Liang Qiao
DeepFLR facilitates false localization rate control in phosphoproteomics. Nature communications 14 (1) (2023)
Yi Yang, Liang Qiao
Data-independent acquisition proteomics methods for analyzing post-translational modifications. Proteomics (2022)
Yi Yang, Ling Lin, Liang Qiao
Deep learning approaches for data-independent acquisition proteomics. Expert review of proteomics 18 (12) (2021)
Zhenzhen Han, Jia Yi, Yi Yang, Dandan Li, Cheng Peng, Shuping Long, Xinyan Peng, Yuhui Shen, Bao-Hong Liu, Liang Qiao
SERS and MALDI-TOF MS based plasma exosome profiling for rapid detection of osteosarcoma. The Analyst 146 (21) (2021)
Yi Yang, Guoquan Yan, Siyuan Kong, Mengxi Wu, Peng-Yuan Yang, Wei-Qian Cao, Liang Qiao
GproDIA enables data-independent acquisition glycoproteomics with comprehensive statistical control. Nature communications 12 (1) (2021)
Shuping Long, Yi Yang, Chengpin Shen, Yiwen Wang, Anmei Deng, Qin Qin, Liang Qiao
Metaproteomics characterizes human gut microbiome function in colorectal cancer. NPJ biofilms and microbiomes 6 (1) (2020)
Yi Yang, Peter L Horvatovich, Liang Qiao
Fragment Mass Spectrum Prediction Facilitates Site Localization of Phosphorylation. Journal of proteome research 20 (1) (2020)
Yi Yang, Xiaohui Liu, Chengpin Shen, Yu Lin, Pengyuan Yang, Liang Qiao
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics. Nature communications 11 (1) (2020)