Yu-Dong Cai (Yudong Cai, Yu Dong Cai)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 77

Top Topics

Machine Learning

Gene Expression

Congenital Heart Disease

Top Venues

Life (Basel, Switzerland)

BioMed research international

This page only lists publications with an associated author ORCID identifier.

Publications

Qinglan Ma, Yulong Shen, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Machine Learning Reveals Impacts of Smoking on Gene Profiles of Different Cell Types in Lung. Life (Basel, Switzerland) 14 (4) (2024)
Yiling Qiu, Tao Huang, Yu-Dong Cai
Review of predicting protein stability changes upon variations. Proteomics 24 (12-13) (2024)
Qinglan Ma, Yu-Hang Zhang, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Machine Learning in Identifying Marker Genes for Congenital Heart Diseases of Different Cardiac Cell Types. Life (Basel, Switzerland) 14 (8) (2024)
Yiling Qiu, Tao Huang, Yu-Dong Cai
Review of predicting protein stability changes upon variations. Proteomics (2024)
Qinglan Ma, Yulong Shen, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Machine Learning Reveals Impacts of Smoking on Gene Profiles of Different Cell Types in Lung. Life (Basel, Switzerland) 14 (4) (2024)
ShiJian Ding, HuiPing Liao, FeiMing Huang, Lei Chen, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Analyzing domain features of small proteins using a machine-learning method. Proteomics 24 (16) (2024)
ShiJian Ding, HuiPing Liao, FeiMing Huang, Lei Chen, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Analyzing domain features of small proteins using a machine-learning method. Proteomics (2024)
Qing-Lan Ma, Fei-Ming Huang, Wei Guo, Kai-Yan Feng, Tao Huang, Yu-Dong Cai
Machine Learning Classification of Time since BNT162b2 COVID-19 Vaccination Based on Array-Measured Antibody Activity. Life (Basel, Switzerland) 13 (6) (2023)
Qinglan Ma, FeiMing Huang, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of Phase-Separation-Protein-Related Function Based on Gene Ontology by Using Machine Learning Methods. Life (Basel, Switzerland) 13 (6) (2023)
Jingxin Ren, Yu-Hang Zhang, Wei Guo, Kaiyan Feng, Ye Yuan, Tao Huang, Yu-Dong Cai
Identification of Genes Associated with the Impairment of Olfactory and Gustatory Functions in COVID-19 via Machine-Learning Methods. Life (Basel, Switzerland) 13 (3) (2023)
Jingxin Ren, Yu-Hang Zhang, Wei Guo, Kaiyan Feng, Ye Yuan, Tao Huang, Yu-Dong Cai
Identification of Genes Associated with the Impairment of Olfactory and Gustatory Functions in COVID-19 via Machine-Learning Methods. Life (Basel, Switzerland) 13 (3) (2023)
Yaochen Xu, Qinglan Ma, Jingxin Ren, Lei Chen, Wei Guo, Kaiyan Feng, Zhenbing Zeng, Tao Huang, Yu-Dong Cai
Using Machine Learning Methods in Identifying Genes Associated with COVID-19 in Cardiomyocytes and Cardiac Vascular Endothelial Cells. Life (Basel, Switzerland) 13 (4) (2023)
FeiMing Huang, QingLan Ma, JingXin Ren, JiaRui Li, Fen Wang, Tao Huang, Yu-Dong Cai
Identification of Smoking-Associated Transcriptome Aberration in Blood with Machine Learning Methods. BioMed research international 2023 (2023)
Yaochen Xu, Qinglan Ma, Jingxin Ren, Lei Chen, Wei Guo, Kaiyan Feng, Zhenbing Zeng, Tao Huang, Yu-Dong Cai
Using Machine Learning Methods in Identifying Genes Associated with COVID-19 in Cardiomyocytes and Cardiac Vascular Endothelial Cells. Life (Basel, Switzerland) 13 (4) (2023)
Qinglan Ma, FeiMing Huang, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of Phase-Separation-Protein-Related Function Based on Gene Ontology by Using Machine Learning Methods. Life (Basel, Switzerland) 13 (6) (2023)
FeiMing Huang, QingLan Ma, JingXin Ren, JiaRui Li, Fen Wang, Tao Huang, Yu-Dong Cai
Identification of Smoking-Associated Transcriptome Aberration in Blood with Machine Learning Methods. BioMed research international 2023 (2023)
Jing-Xin Ren, Qian Gao, Xiao-Chao Zhou, Lei Chen, Wei Guo, Kai-Yan Feng, Lin Lu, Tao Huang, Yu-Dong Cai
Identification of Gene Markers Associated with COVID-19 Severity and Recovery in Different Immune Cell Subtypes. Biology 12 (7) (2023)
JingXin Ren, Qian Gao, XianChao Zhou, Lei Chen, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of key gene expression associated with quality of life after recovery from COVID-19. Medical & biological engineering & computing 62 (4) (2023)
JingXin Ren, Qian Gao, XianChao Zhou, Lei Chen, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of key gene expression associated with quality of life after recovery from COVID-19. Medical & biological engineering & computing (2023)
Qing-Lan Ma, Fei-Ming Huang, Wei Guo, Kai-Yan Feng, Tao Huang, Yu-Dong Cai
Machine Learning Classification of Time since BNT162b2 COVID-19 Vaccination Based on Array-Measured Antibody Activity. Life (Basel, Switzerland) 13 (6) (2023)
FeiMing Huang, QingLan Ma, JingXin Ren, JiaRui Li, Fen Wang, Tao Huang, Yu-Dong Cai
Identification of Smoking-Associated Transcriptome Aberration in Blood with Machine Learning Methods. BioMed research international 2023 (2023)
Yaochen Xu, Qinglan Ma, Jingxin Ren, Lei Chen, Wei Guo, Kaiyan Feng, Zhenbing Zeng, Tao Huang, Yu-Dong Cai
Using Machine Learning Methods in Identifying Genes Associated with COVID-19 in Cardiomyocytes and Cardiac Vascular Endothelial Cells. Life (Basel, Switzerland) 13 (4) (2023)
JingXin Ren, Qian Gao, XianChao Zhou, Lei Chen, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of key gene expression associated with quality of life after recovery from COVID-19. Medical & biological engineering & computing 62 (4) (2023)
Yong Yang, Yu-Hang Zhang, Jingxin Ren, Kaiyan Feng, Zhandong Li, Tao Huang, Yu-Dong Cai
Identification of Colon Immune Cell Marker Genes Using Machine Learning Methods. Life (Basel, Switzerland) 13 (9) (2023)
Jingxin Ren, Yu-Hang Zhang, Wei Guo, Kaiyan Feng, Ye Yuan, Tao Huang, Yu-Dong Cai
Identification of Genes Associated with the Impairment of Olfactory and Gustatory Functions in COVID-19 via Machine-Learning Methods. Life (Basel, Switzerland) 13 (3) (2023)
Yaochen Xu, Qinglan Ma, Jingxin Ren, Lei Chen, Wei Guo, Kaiyan Feng, Zhenbing Zeng, Tao Huang, Yu-Dong Cai
Using Machine Learning Methods in Identifying Genes Associated with COVID-19 in Cardiomyocytes and Cardiac Vascular Endothelial Cells. Life (Basel, Switzerland) 13 (4) (2023)
Lei Chen, ZhanDong Li, ShiQi Zhang, Yu-Hang Zhang, Tao Huang, Yu-Dong Cai
Predicting RNA 5-Methylcytosine Sites by Using Essential Sequence Features and Distributions. BioMed research international 2022 (2022)
Jingxin Ren, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identifying MicroRNA Markers That Predict COVID-19 Severity Using Machine Learning Methods. Life (Basel, Switzerland) 12 (12) (2022)
Qiao Sun, Lin Bai, Shaopin Zhu, Lu Cheng, Yang Xu, Yu-Dong Cai, Hui Chen, Jian Zhang
Analysis of Lymphoma-Related Genes with Gene Ontology and Kyoto Encyclopedia of Genes and Genomes Enrichment. BioMed research international 2022 (2022)
Jingxin Ren, XianChao Zhou, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of Methylation Signatures and Rules for Sarcoma Subtypes by Machine Learning Methods. BioMed research international 2022 (2022)
Xiaohong Li, Xianchao Zhou, Shijian Ding, Lei Chen, Kaiyan Feng, Hao Li, Tao Huang, Yu-Dong Cai
Identification of Transcriptome Biomarkers for Severe COVID-19 with Machine Learning Methods. Biomolecules 12 (12) (2022)
Jingxin Ren, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identifying MicroRNA Markers That Predict COVID-19 Severity Using Machine Learning Methods. Life (Basel, Switzerland) 12 (12) (2022)
Jingxin Ren, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identifying MicroRNA Markers That Predict COVID-19 Severity Using Machine Learning Methods. Life (Basel, Switzerland) 12 (12) (2022)
Steven Wang, Runxin Wu, Jiaqi Lu, Yijia Jiang, Tao Huang, Yu-Dong Cai
Protein-protein interaction networks as miners of biological discovery. Proteomics 22 (15-16) (2022)
Jingxin Ren, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identifying MicroRNA Markers That Predict COVID-19 Severity Using Machine Learning Methods. Life (Basel, Switzerland) 12 (12) (2022)
Feiming Huang, Lei Chen, Wei Guo, Xianchao Zhou, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identifying COVID-19 Severity-Related SARS-CoV-2 Mutation Using a Machine Learning Method. Life (Basel, Switzerland) 12 (6) (2022)
Shijian Ding, Deling Wang, Xianchao Zhou, Lei Chen, Kaiyan Feng, Xianling Xu, Tao Huang, Zhandong Li, Yu-Dong Cai
Predicting Heart Cell Types by Using Transcriptome Profiles and a Machine Learning Method. Life (Basel, Switzerland) 12 (2) (2022)
Xiaohong Li, Xianchao Zhou, Shijian Ding, Lei Chen, Kaiyan Feng, Hao Li, Tao Huang, Yu-Dong Cai
Identification of Transcriptome Biomarkers for Severe COVID-19 with Machine Learning Methods. Biomolecules 12 (12) (2022)
Lei Chen, Zi Mei, Wei Guo, ShiJian Ding, Tao Huang, Yu-Dong Cai
Recognition of Immune Cell Markers of COVID-19 Severity with Machine Learning Methods. BioMed research international 2022 (2022)
Yu-Hang Zhang, ShiJian Ding, Lei Chen, Tao Huang, Yu-Dong Cai
Subcellular Localization Prediction of Human Proteins Using Multifeature Selection Methods. BioMed research international 2022 (2022)
Zhandong Li, Wei Guo, Shijian Ding, Kaiyan Feng, Lin Lu, Tao Huang, Yu-Dong Cai
Detecting Blood Methylation Signatures in Response to Childhood Cancer Radiotherapy via Machine Learning Methods. Biology 11 (4) (2022)
Yu-Hang Zhang, Zhan Dong Li, Tao Zeng, Lei Chen, Tao Huang, Yu-Dong Cai
Screening gene signatures for clinical response subtypes of lung transplantation. Molecular genetics and genomics : MGG 297 (5) (2022)
Zhan Dong Li, Xiangtian Yu, Zi Mei, Tao Zeng, Lei Chen, Xian Ling Xu, Hao Li, Tao Huang, Yu-Dong Cai
Identifying luminal and basal mammary cell specific genes and their expression patterns during pregnancy. PloS one 17 (4) (2022)
Jingxin Ren, XianChao Zhou, Wei Guo, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identification of Methylation Signatures and Rules for Sarcoma Subtypes by Machine Learning Methods. BioMed research international 2022 (2022)
Xiaohong Li, Xianchao Zhou, Shijian Ding, Lei Chen, Kaiyan Feng, Hao Li, Tao Huang, Yu-Dong Cai
Identification of Transcriptome Biomarkers for Severe COVID-19 with Machine Learning Methods. Biomolecules 12 (12) (2022)
FeiMing Huang, Lei Chen, Wei Guo, Tao Huang, Yu-Dong Cai
Identification of Human Cell Cycle Phase Markers Based on Single-Cell RNA-Seq Data by Using Machine Learning Methods. BioMed research international 2022 (2022)
Xiaohong Li, Xianchao Zhou, Shijian Ding, Lei Chen, Kaiyan Feng, Hao Li, Tao Huang, Yu-Dong Cai
Identification of Transcriptome Biomarkers for Severe COVID-19 with Machine Learning Methods. Biomolecules 12 (12) (2022)
Xianchao Zhou, Shijian Ding, Deling Wang, Lei Chen, Kaiyan Feng, Tao Huang, Zhandong Li, Yu-Dong Cai
Identification of Cell Markers and Their Expression Patterns in Skin Based on Single-Cell RNA-Sequencing Profiles. Life (Basel, Switzerland) 12 (4) (2022)
Lei Chen, Zhandong Li, Tao Zeng, Yu-Hang Zhang, Hao Li, Tao Huang, Yu-Dong Cai
Predicting gene phenotype by multi-label multi-class model based on essential functional features. Molecular genetics and genomics : MGG 296 (4) (2021)
Yu-Hang Zhang, Zhandong Li, Tao Zeng, Lei Chen, Hao Li, Margarita Gamarra, Romany F Mansour, José Escorcia-Gutierrez, Tao Huang, Yu-Dong Cai
Investigating gene methylation signatures for fetal intolerance prediction. PloS one 16 (4) (2021)
Lei Chen, Zhandong Li, Tao Zeng, Yu-Hang Zhang, KaiYan Feng, Tao Huang, Yu-Dong Cai
Identifying COVID-19-Specific Transcriptomic Biomarkers with Machine Learning Methods. BioMed research international 2021 (2021)
Guo-Hua Huang, Yu-Hang Zhang, Lei Chen, You Li, Tao Huang, Yu-Dong Cai
Identifying Lung Cancer Cell Markers with Machine Learning Methods and Single-Cell RNA-Seq Data. Life (Basel, Switzerland) 11 (9) (2021)
YuHang Zhang, Tao Zeng, Lei Chen, ShiJian Ding, Tao Huang, Yu-Dong Cai
Identification of COVID-19 Infection-Related Human Genes Based on a Random Walk Model in a Virus-Human Protein Interaction Network. BioMed research international 2020 (2020)
Min Li, XiaoYong Pan, Tao Zeng, Yu-Hang Zhang, Kaiyan Feng, Lei Chen, Tao Huang, Yu-Dong Cai
Alternative Polyadenylation Modification Patterns Reveal Essential Posttranscription Regulatory Mechanisms of Tumorigenesis in Multiple Tumor Types. BioMed research international 2020 (2020)
Lei Chen, Tao Zeng, Xiaoyong Pan, Yu-Hang Zhang, Tao Huang, Yu-Dong Cai
Identifying Methylation Pattern and Genes Associated with Breast Cancer Subtypes. International journal of molecular sciences 20 (17) (2019)
JiaRui Li, Lin Lu, Yu-Hang Zhang, YaoChen Xu, Min Liu, KaiYan Feng, Lei Chen, XiangYin Kong, Tao Huang, Yu-Dong Cai
Identification of leukemia stem cell expression signatures through Monte Carlo feature selection strategy and support vector machine. Cancer gene therapy 27 (1-2) (2019)
Fei Yuan, Xiaoyong Pan, Lei Chen, Yu-Hang Zhang, Tao Huang, Yu-Dong Cai
Analysis of Protein-Protein Functional Associations by Using Gene Ontology and KEGG Pathway. BioMed research international 2019 (2019)
Lei Chen, Yu-Hang Zhang, Guohua Huang, Xiaoyong Pan, Tao Huang, Yu-Dong Cai
Inferring novel genes related to oral cancer with a network embedding method and one-class learning algorithms. Gene therapy 26 (12) (2019)
Xiaoyong Pan, Lei Chen, Kai-Yan Feng, Xiao-Hua Hu, Yu-Hang Zhang, Xiang-Yin Kong, Tao Huang, Yu-Dong Cai
Analysis of Expression Pattern of snoRNAs in Different Cancer Types with Machine Learning Algorithms. International journal of molecular sciences 20 (9) (2019)
Xiaoyong Pan, Xiaohua Hu, Yu Hang Zhang, Kaiyan Feng, Shao Peng Wang, Lei Chen, Tao Huang, Yu-Dong Cai
Identifying Patients with Atrioventricular Septal Defect in Down Syndrome Populations by Using Self-Normalizing Neural Networks and Feature Selection. Genes 9 (4) (2018)
Xiaoyong Pan, XiaoHua Hu, Yu-Hang Zhang, Lei Chen, LiuCun Zhu, ShiBao Wan, Tao Huang, Yu-Dong Cai
Identification of the copy number variant biomarkers for breast cancer subtypes. Molecular genetics and genomics : MGG 294 (1) (2018)
Deling Wang, Jia-Rui Li, Yu-Hang Zhang, Lei Chen, Tao Huang, Yu-Dong Cai
Identification of Differentially Expressed Genes between Original Breast Cancer and Xenograft Using Machine Learning Algorithms. Genes 9 (3) (2018)
Lei Chen, Shiqi Zhang, Xiaoyong Pan, XiaoHua Hu, Yu-Hang Zhang, Fei Yuan, Tao Huang, Yu-Dong Cai
HIV infection alters the human epigenetic landscape. Gene therapy 26 (1-2) (2018)
Yu-Dong Cai, Shiqi Zhang, Yu-Hang Zhang, Xiaoyong Pan, KaiYan Feng, Lei Chen, Tao Huang, Xiangyin Kong
Identification of the Gene Expression Rules That Define the Subtypes in Glioma. Journal of clinical medicine 7 (10) (2018)
JiaRui Li, Lei Chen, Yu-Hang Zhang, XiangYin Kong, Tao Huang, Yu-Dong Cai
A Computational Method for Classifying Different Human Tissues with Quantitatively Tissue-Specific Expressed Genes. Genes 9 (9) (2018)
Yu-Dong Cai, Tao Huang, Jialiang Yang
Applications of Bioinformatics and Systems Biology in Precision Medicine and Immunooncology. BioMed research international 2018 (2018)
Lei Chen, Yu-Hang Zhang, Xiaoyong Pan, Min Liu, Shaopeng Wang, Tao Huang, Yu-Dong Cai
Tissue Expression Difference between mRNAs and lncRNAs. International journal of molecular sciences 19 (11) (2018)
Fei Yuan, Yu-Hang Zhang, Xiang-Yin Kong, Yu-Dong Cai
Identification of Candidate Genes Related to Inflammatory Bowel Disease Using Minimum Redundancy Maximum Relevance, Incremental Feature Selection, and the Shortest-Path Approach. BioMed research international 2017 (2017)
Lei Chen, Yu-Hang Zhang, Guohua Huang, Xiaoyong Pan, ShaoPeng Wang, Tao Huang, Yu-Dong Cai
Discriminating cirRNAs from other lncRNAs using a hierarchical extreme learning machine (H-ELM) algorithm with feature selection. Molecular genetics and genomics : MGG 293 (1) (2017)
Lei Chen, Yu-Hang Zhang, ShaoPeng Wang, YunHua Zhang, Tao Huang, Yu-Dong Cai
Prediction and analysis of essential genes using the enrichments of gene ontology and KEGG pathways. PloS one 12 (9) (2017)
Lei Chen, Yu-Hang Zhang, JiaRui Li, ShaoPeng Wang, YunHua Zhang, Tao Huang, Yu-Dong Cai
Deciphering the Relationship between Obesity and Various Diseases from a Network Perspective. Genes 8 (12) (2017)
Lei Chen, Jing Lu, Tao Huang, Yu-Dong Cai
A computational method for the identification of candidate drugs for non-small cell lung cancer. PloS one 12 (8) (2017)
Chenglin Liu, Yu-Hang Zhang, Qinfang Deng, Yi-Xue Li, Tao Huang, Songwen Zhou, Yu-Dong Cai
Cancer-Related Triplets of mRNA-lncRNA-miRNA Revealed by Integrative Network in Uterine Corpus Endometrial Carcinoma. BioMed research international 2017 (2017)
Lei Chen, Jing Yang, Zhihao Xing, Fei Yuan, Yang Shu, YunHua Zhang, XiangYin Kong, Tao Huang, HaiPeng Li, Yu-Dong Cai
An integrated method for the identification of novel genes related to oral cancer. PloS one 12 (4) (2017)
Hang Yin, ShaoPeng Wang, Yu-Hang Zhang, Yu-Dong Cai, Hai-Lin Liu
Analysis of Important Gene Ontology Terms and Biological Pathways Related to Pancreatic Cancer. BioMed research international 2016 (2016)
Guohua Huang, Chen Chu, Tao Huang, Xiangyin Kong, Yunhua Zhang, Ning Zhang, Yu-Dong Cai
Exploring Mouse Protein Function via Multiple Approaches. PloS one 11 (11) (2016)
Yu-Hang Zhang, Chen Chu, Shaopeng Wang, Lei Chen, Jing Lu, XiangYin Kong, Tao Huang, HaiPeng Li, Yu-Dong Cai
The Use of Gene Ontology Term and KEGG Pathway Enrichment for Analysis of Drug Half-Life. PloS one 11 (10) (2016)