Zixuan Cang

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 22

Top Topics

Machine Learning

Duchenne Muscular Dystrophy

Top Venues

PLoS computational biology

Nature communications

Physical chemistry chemical physics : PCCP

This page only lists publications with an associated author ORCID identifier.

Publications

Michael V Zaragoza, Thuy-Anh Bui, Halida P Widyastuti, Mehrsa Mehrabi, Zixuan Cang, Yutong Sha, Anna Grosberg, Qing Nie
LMNA -Related Dilated Cardiomyopathy: Single-Cell Transcriptomics during Patient-derived iPSC Differentiation Support Cell type and Lineage-specific Dysregulation of Gene Expression and Development for Cardiomyocytes and Epicardium-Derived Cells with Lamin A/C Haploinsufficiency. bioRxiv : the preprint server for biology (2024)
Michael V Zaragoza, Thuy-Anh Bui, Halida P Widyastuti, Mehrsa Mehrabi, Zixuan Cang, Yutong Sha, Anna Grosberg, Qing Nie
LMNA -Related Dilated Cardiomyopathy: Single-Cell Transcriptomics during Patient-Derived iPSC Differentiation Support Cell Type and Lineage-Specific Dysregulation of Gene Expression and Development for Cardiomyocytes and Epicardium-Derived Cells with Lamin A/C Haploinsufficiency. Cells 13 (17) (2024)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Zixuan Cang, Yanxiang Zhao, Axel A Almet, Adam Stabell, Raul Ramos, Maksim V Plikus, Scott X Atwood, Qing Nie
Screening cell-cell communication in spatial transcriptomics via collective optimal transport. Nature methods 20 (2) (2023)
Honglei Ren, Benjamin L Walker, Zixuan Cang, Qing Nie
Identifying multicellular spatiotemporal organization of cells with SpaceFlow. Nature communications 13 (1) (2022)
Benjamin L Walker, Zixuan Cang, Honglei Ren, Eric Bourgain-Chang, Qing Nie
Deciphering tissue structure and function using spatial transcriptomics. Communications biology 5 (1) (2022)
Zixuan Cang, Yangyang Wang, Qixuan Wang, Ken W Y Cho, William C Holmes, Qing Nie
A multiscale model via single-cell transcriptomics reveals robust patterning mechanisms during early mammalian embryo development. PLoS computational biology 17 (3) (2021)
Ruiqiong Guo, Zixuan Cang, Jiaqi Yao, Miyeon Kim, Erin Deans, Guowei Wei, Seung-Gu Kang, Kristen A Gaffney
Structural cavities are critical to balancing stability and activity of a membrane-integral enzyme. Proceedings of the National Academy of Sciences of the United States of America 117 (36) (2020)
Zixuan Cang, Qing Nie
Inferring spatial and signaling relationships between cells from single cell transcriptomic data. Nature communications 11 (1) (2020)
Menglun Wang, Zixuan Cang, Guo-Wei Wei
A topology-based network tree for the prediction of protein-protein binding affinity changes following mutation. Nature machine intelligence 2 (2) (2020)
Duc Duy Nguyen, Zixuan Cang, Guo-Wei Wei
A review of mathematical representations of biomolecular data. Physical chemistry chemical physics : PCCP 22 (8) (2020)
Zixuan Cang, Lin Mu, Guo-Wei Wei
Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening. PLoS computational biology 14 (1) (2018)
Zixuan Cang, Guo-Wei Wei
Integration of element specific persistent homology and machine learning for protein-ligand binding affinity prediction. International journal for numerical methods in biomedical engineering 34 (2) (2017)
Zixuan Cang, Guo-Wei Wei
TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions. PLoS computational biology 13 (7) (2017)