Gdaphen, R pipeline to identify the most important qualitative and quantitative predictor variables from phenotypic data.
Maria Del Mar Muñiz MorenoClaire Gavériaux-RuffYann HéraultPublished in: BMC bioinformatics (2023)
Gdaphen makes the analysis of phenotypic data much easier for medical or preclinical behavioral researchers, providing an integrated framework to perform: (1) pre-processing steps as data imputation or anonymization; (2) a full statistical assessment to identify which variables are the most important discriminators; and (3) state of the art visualizations ready for publication to support the conclusions of the analyses. Gdaphen is open-source and freely available at https://github.com/munizmom/gdaphen , together with vignettes, documentation for the functions and examples to guide you in each own implementation.