Resolving the Taxonomic Status of Chamelea gallina and C. striatula (Veneridae, Bivalvia): A Combined Molecular Cytogenetic and Phylogenetic Approach.
Daniel García-SoutoVesa QarkaxhijaJuan J PasantesPublished in: BioMed research international (2017)
The striped venus clams Chamelea gallina and C. striatula are commercially important bivalves inhabiting European and North African coastal waters. The taxonomic status of these taxa has been the subject of debate for decades. In order to elucidate this issue, we generated 5S and 28S ribosomal RNA and H3 histone gene probes and mapped them by fluorescent in situ hybridization to the chromosomes of morphologically identified striped venus clams, collected from four geographically distant Atlantic and Mediterranean populations. The nucleotide variation at the three DNA markers, that is, the nuclear internal transcribed spacer 2 (ITS2), the mitochondrial cytochrome c oxidase subunit I (COI), and the large ribosomal subunit rRNA (16S) fragments, was also studied and the resultant phylogenetic trees were evaluated. Striking differences in both the chromosome distribution of these genes and the clustering of the samples on the phylogenetic trees observed provide clear evidence that C. gallina and C. striatula are separated species.
Keyphrases
- single molecule
- genome wide
- living cells
- copy number
- nucleic acid
- genome wide identification
- dna methylation
- small molecule
- lymph node
- oxidative stress
- climate change
- heavy metals
- genetic diversity
- circulating tumor
- single cell
- cell free
- rna seq
- fluorescence imaging
- genome wide analysis
- risk assessment
- tertiary care
- photodynamic therapy