Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing.
Jennifer K SpinlerSabeen RazaJessica K RungeRuth Ann LunaPublished in: Microbiology resource announcements (2019)
Hybrid de novo assembly of Illumina/Nanopore sequence data produced complete circular sequences of the chromosome and a plasmid for the multidrug-resistant Pseudomonas aeruginosa Houston-1 strain. This provides a high-quality representative sequence for a lineage endemic to a pediatric cystic fibrosis care center at Texas Children's Hospital.
Keyphrases
- pseudomonas aeruginosa
- multidrug resistant
- cystic fibrosis
- acinetobacter baumannii
- drug resistant
- single molecule
- gram negative
- healthcare
- single cell
- biofilm formation
- klebsiella pneumoniae
- lung function
- escherichia coli
- solid state
- young adults
- palliative care
- high throughput sequencing
- electronic health record
- quality improvement
- amino acid
- pain management
- adverse drug
- affordable care act
- genome wide