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Ryūtō: network-flow based transcriptome reconstruction.

Thomas GatterPeter F Stadler
Published in: BMC bioinformatics (2019)
Its performance compares favorably with state of the art methods on both simulated and real-life datasets. Ryūtō calls 1-4% more true transcripts, while calling 5-35% less false predictions compared to the next best competitor.
Keyphrases
  • rna seq
  • single cell
  • genome wide
  • gene expression
  • network analysis