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Evolution of Opsin Genes in Caddisflies (Insecta: Trichoptera).

Ashlyn PowellJacqueline HeckenhauerSteffen U PaulsBlanca Ríos-ToumaRyoichi B KuranishiRalph W HolzenthalErnesto Razuri-GonzalesSeth BybeePaul B Frandsen
Published in: Genome biology and evolution (2024)
Insects have evolved complex and diverse visual systems in which light-sensing protein molecules called opsins couple with a chromophore to form photopigments. Insect photopigments group into three major gene families based on wavelength sensitivity: long wavelength (LW), short wavelength (SW), and ultraviolet wavelength (UV). Here, we identified 123 opsin sequences from whole genome assemblies across 25 caddisfly species (Insecta: Trichoptera). We discovered the LW opsins have the most diversity across species and form two separate clades in the opsin gene tree. Conversely, we observed a loss of the SW opsin in half of the trichopteran species in this study, which might be associated with the fact that caddisflies are active during low-light conditions. Lastly, we found a single copy of the UV opsin in all the species in this study, with one exception: Athripsodes cinereus has two copies of the UV opsin and resides within a clade of caddisflies with colorful wing patterns.
Keyphrases
  • genome wide
  • genetic diversity
  • copy number
  • genome wide identification
  • dna methylation
  • zika virus