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Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation.

Guanjue XiangBelinda GiardineLin AnChen SunCheryl A KellerElisabeth F HeustonStacie M AndersonMartha KirbyDavid BodineYu ZhangRoss Cameron Hardison
Published in: BMC bioinformatics (2023)
The package Snapshot can identify all distinct clusters of genomic locations with unique epigenetic signal patterns during cell differentiation. It outperforms other methods in terms of interpreting and reproducing the identified cCREs clusters. The package of Snapshot is available at GitHub: https://github.com/guanjue/Snapshot .
Keyphrases
  • dna methylation
  • gene expression
  • single cell
  • rna seq