haploR: an R package for querying web-based annotation tools.

Ilya Y Zhbannikov Konstantin G ArbeevSvetlana UkraintsevaAnatoliy I Yashin

Published in: F1000Research (2017)

We developed haploR, an R package for querying web based genome annotation tools HaploReg and RegulomeDB. haploR gathers information in a data frame which is suitable for downstream bioinformatic analyses. This will facilitate post-genome wide association studies streamline analysis for rapid discovery and interpretation of genetic associations.

Keyphrases

genome wide association
genome wide
rna seq
small molecule
electronic health record
high throughput
healthcare
health information
dna methylation
gene expression
data analysis
quantum dots