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Physcraper: a Python package for continually updated phylogenetic trees using the Open Tree of Life.

Luna L Sánchez-ReyesMartha KandzioraEmily Jane McTavish
Published in: BMC bioinformatics (2021)
The Physcraper workflow showcases the benefits of doing open science for phylogenetics, encouraging researchers to strive for better scientific sharing practices. Physcraper can be used with any OS and is released under an open-source license. Detailed instructions for installation and usage are available at https://physcraper.readthedocs.io.
Keyphrases
  • minimally invasive
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  • electronic health record
  • genetic diversity