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A novel computational pathology approach for identifying gene signatures prognostic of disease-free survival for papillary thyroid carcinomas.

Shayan MonabbatiSirvan KhalighiPingfu FuQiuying ShiSylvia L AsaAnant Madabhushi
Published in: European journal of cancer (Oxford, England : 1990) (2024)
There was a 17.8% improvement in the C-index (from 0.605 to 0.783) for 123 cPTCs and 15% (from 0.576 to 0.726) for 38 fvPTCs compared to the standalone gene-expression signature. Hazard ratios also improved for cPTCs from 0.89 (0.67,0.99) to 4.43 (3.65,6.68) and fvPTC from 0.98 (0.76,1.32) to 2.28 (1.87,3.64). We validated the image-based risk model on an independent cohort of 32 cPTCs with hazard ratio 1.8 (1.534,2.167).
Keyphrases
  • free survival
  • papillary thyroid
  • gene expression
  • lymph node metastasis
  • genome wide
  • dna methylation
  • copy number
  • deep learning
  • high grade
  • squamous cell carcinoma
  • machine learning