Synthesis of R-GABA Derivatives via Pd(II) Catalyzed Enantioselective C(sp 3 )-H Arylation and Virtual Validation with GABA B1 Receptor for Potential leads.
Smitha MohanlalDiprupa SahaShubhant PandeyRudresh AcharyaNagendra K SharmaPublished in: Chemistry, an Asian journal (2024)
GABA (γ-amino butyric acid) analogues like baclofen, tolibut, phenibut, etc., are well-known GABA B1 inhibitors and pharmaceutically important drugs. However, there is a huge demand for more chiral GABA aryl analogues with promising pharmacological actions. Here, we demonstrate the chiral ligand acetyl-protected amino quinoline (APAQ) mediated enantioselective synthesis of GABA B1 inhibitor drug scaffolds from easily accessible GABA via Pd-catalyzed C(sp 3 )-H activation. The synthetic methodology shows moderate to good yields, up to 74% of ee. We have successfully demonstrated the deprotection and removal of the directing group to synthesize R-tolibut in 86% yield. Further, we employed computation to probe the binding of R-GABA analogues to the extracellular domain of the human GABA B1 receptor. Our Rosetta-based molecular docking calculations show better binding for four R-enantiomers of GABA analogues than R-baclofen and R-phenibut. In addition, we employed GROMACS MD simulations and MMPB(GB)SA calculations to identify per-residue contribution to binding free energy. Our computational results suggest analogues (3R)-4-amino-3-(3,4-dimethylphenyl) butanoic acid, (3R)-4-amino-3-(3-fluorophenyl) butanoic acid, (3R)-3-(4-acetylphenyl)-4-aminobutanoic acid, (3R)-4-amino-3-(4-methoxyphenyl) butanoic acid, and (3R)-4-amino-3-phenylbutanoic acid are potential leads which could be synthesized from our methodology reported here.
Keyphrases
- molecular docking
- molecular dynamics simulations
- molecular dynamics
- endothelial cells
- structure activity relationship
- binding protein
- density functional theory
- mass spectrometry
- ionic liquid
- emergency department
- high intensity
- capillary electrophoresis
- climate change
- human health
- dna binding
- transcription factor
- single molecule
- tissue engineering
- drug induced