Transcriptome-wide association study of attention deficit hyperactivity disorder identifies associated genes and phenotypes.
Calwing LiaoAlexandre D LaporteDan SpiegelmanFulya AkcimenRidha JooberPatrick A DionGuy A RouleauPublished in: Nature communications (2019)
Attention deficit/hyperactivity disorder (ADHD) is a common neurodevelopmental psychiatric disorder. Genome-wide association studies (GWAS) have identified several loci associated with ADHD. However, understanding the biological relevance of these genetic loci has proven to be difficult. Here, we conduct an ADHD transcriptome-wide association study (TWAS) consisting of 19,099 cases and 34,194 controls and identify 9 transcriptome-wide significant hits, of which 6 genes were not implicated in the original GWAS. We demonstrate that two of the previous GWAS hits can be largely explained by expression regulation. Probabilistic causal fine-mapping of TWAS signals prioritizes KAT2B with a posterior probability of 0.467 in the dorsolateral prefrontal cortex and TMEM161B with a posterior probability of 0.838 in the amygdala. Furthermore, pathway enrichment identifies dopaminergic and norepinephrine pathways, which are highly relevant for ADHD. Overall, our findings highlight the power of TWAS to identify and prioritize putatively causal genes.
Keyphrases
- attention deficit hyperactivity disorder
- genome wide
- prefrontal cortex
- autism spectrum disorder
- dna methylation
- working memory
- copy number
- genome wide association
- gene expression
- single cell
- mental health
- air pollution
- functional connectivity
- transcranial direct current stimulation
- transcription factor
- mass spectrometry
- binding protein
- resting state
- genome wide identification
- stress induced