xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments.

Jesse FarekDaniel HughesWilliam J SalernoYiming ZhuAishwarya PisupatiAdam MansfieldOlga KrashenininaAdam C EnglishGinger A Metcalf Eric Boerwinkle Donna M Muzny Richard A Gibbs Ziad M Khan Fritz J Sedlazeck

Published in: GigaScience (2023)

xAtlas is a fast, lightweight, and accurate SNV and small indel calling method. Source code for xAtlas is available under a BSD 3-clause license at https://github.com/jfarek/xatlas.

Keyphrases

high resolution
gene expression