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Recovering genotypes and phenotypes using allele-specific genes.

Gamze GürsoyNancy LuSarah WagnerMark B Gerstein
Published in: Genome biology (2021)
With the recent increase in RNA sequencing efforts using large cohorts of individuals, surveying allele-specific gene expression is becoming increasingly frequent. Here, we report that, despite not containing explicit variant information, a list of genes known to be allele-specific in an individual is enough to recover key variants and link the individuals back to their genotypes and phenotypes. This creates a privacy conundrum.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • single cell
  • healthcare
  • machine learning
  • bioinformatics analysis
  • social media
  • deep learning