SARS-CoV-2 complete genome sequencing from the Italian Campania region using a highly automated next generation sequencing system.

Anna Maria RachiglioLuca De SabatoCristin RomaMichele CennamoMariano FiorenzaDaniela TerraccianoRaffaella PasqualeFrancesca BergantinoErnesta CavalcantiGerardo BottiGabriele VaccariGiuseppe PortellaNicola Normanno

Published in: Journal of translational medicine (2021)

The Genexus system resulted successful for SARS-CoV-2 complete genome sequencing, also in cases with low viral copies. The use of this highly automated system might facilitate the standardization of SARS-CoV-2 sequencing protocols and make faster the identification of novel variants during the pandemic.

Keyphrases

circulating tumor
sars cov
single cell
respiratory syndrome coronavirus
high throughput
machine learning
deep learning
genome wide
copy number