PipeCoV: a pipeline for SARS-CoV-2 genome assembly, annotation and variant identification.
Renato Renison Moreira OliveiraTatianne Costa NegriGisele NunesInácio MedeirosGuilherme AraújoFabricio de Oliveira SilvaJorge Estefano Santana de SouzaRonnie AlvesGuilherme Corrêa de OliveiraPublished in: PeerJ (2022)
https://github.com/alvesrco/pipecov.