Taxifolin Inhibits the Growth of Non-Small-Cell Lung Cancer via Downregulating Genes Displaying Novel and Robust Associations with Immune Evasion Factors.
Xiaozeng LinYing DongYan GuFengxiang WeiJingyi PengYingying SuYanjun WangChengzhi YangSandra Vega NeiraAnil KapoorDamu TangPublished in: Cancers (2023)
Using an LL2 cell-based syngeneic mouse LC model, taxifolin suppressed allografts along with the appearance of 578 differentially expressed genes (DEGs). These DEGs were associated with enhancement of processes related to the extracellular matrix and lymphocyte chemotaxis as well as the reduction in pathways relevant to cell proliferation. From these DEGs, we formulated 12-gene (TxflSig) and 7-gene (TxflSig1) panels; both predicted response to ICB (immune checkpoint blockade) therapy more effectively in non-small-cell lung cancer (NSCLC) than numerous well-established ICB biomarkers, including PD-L1. In both panels, the mouse counterparts of ITGAL , ITGAX , and TMEM119 genes were downregulated by taxifolin. They were strongly associated with immune suppression in LC, evidenced by their robust correlations with the major immunosuppressive cell types (MDSC, Treg, and macrophage) and multiple immune checkpoints in NSCLC and across multiple human cancer types. ITGAL, ITGAX, and IIT (ITGAL-ITGAX-TMEM119) effectively predicted NSCLC's response to ICB therapy; IIT stratified the mortality risk of NSCLC. The stromal expressions of ITGAL and ITGAX, together with tumor expression of TMEM119 in NSCLC, were demonstrated. Collectively, we report multiple novel ICB biomarkers-TxflSig, TxflSig1, IIT, ITGAL, and ITGAX-and taxifolin-derived attenuation of immunosuppressive activities in NSCLC, suggesting the inclusion of taxifolin in ICB therapies for NSCLC.
Keyphrases
- small cell lung cancer
- advanced non small cell lung cancer
- genome wide
- brain metastases
- genome wide identification
- extracellular matrix
- cell proliferation
- single cell
- cell therapy
- copy number
- bone marrow
- epidermal growth factor receptor
- bioinformatics analysis
- stem cells
- mesenchymal stem cells
- dna methylation
- papillary thyroid
- signaling pathway
- risk factors
- cell cycle
- cardiovascular events
- long non coding rna
- binding protein
- pi k akt
- lymph node metastasis