Deep Learning Approach for Discovery of In Silico Drugs for Combating COVID-19.
Nishant JhaDeepak PrasharMamoon RashidMohammad ShafiqRazaullah KhanCatalin Iulian PruncuShams Tabrez SiddiquiM Saravana KumarPublished in: Journal of healthcare engineering (2021)
Early diagnosis of pandemic diseases such as COVID-19 can prove beneficial in dealing with difficult situations and helping radiologists and other experts manage staffing more effectively. The application of deep learning techniques for genetics, microscopy, and drug discovery has created a global impact. It can enhance and speed up the process of medical research and development of vaccines, which is required for pandemics such as COVID-19. However, current drugs such as remdesivir and clinical trials of other chemical compounds have not shown many impressive results. Therefore, it can take more time to provide effective treatment or drugs. In this paper, a deep learning approach based on logistic regression, SVM, Random Forest, and QSAR modeling is suggested. QSAR modeling is done to find the drug targets with protein interaction along with the calculation of binding affinities. Then deep learning models were used for training the molecular descriptor dataset for the robust discovery of drugs and feature extraction for combating COVID-19. Results have shown more significant binding affinities (greater than -18) for many molecules that can be used to block the multiplication of SARS-CoV-2, responsible for COVID-19.
Keyphrases
- sars cov
- deep learning
- coronavirus disease
- respiratory syndrome coronavirus
- artificial intelligence
- clinical trial
- molecular docking
- machine learning
- convolutional neural network
- drug discovery
- small molecule
- high throughput
- healthcare
- single molecule
- optical coherence tomography
- transcription factor
- molecular dynamics simulations
- open label
- label free
- adverse drug