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The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation.

Markus MeierMonika GuptaSerife AkgülMatthew McDougallThomas ImhofDenise NikodemusRaphael ReutenAniel Moya-TorresVu ToFraser G FerensFabian HeideGay Pauline Padilla-MeierPhilipp KukuraWenming HuangBirgit GerischMatthias MörgelinKate PooleRoberto RipaManuel KochJörg Stetefeld
Published in: Nature communications (2023)
Netrin-1 is a bifunctional chemotropic guidance cue that plays key roles in diverse cellular processes including axon pathfinding, cell migration, adhesion, differentiation, and survival. Here, we present a molecular understanding of netrin-1 mediated interactions with glycosaminoglycan chains of diverse heparan sulfate proteoglycans (HSPGs) and short heparin oligosaccharides. Whereas interactions with HSPGs act as platform to co-localise netrin-1 close to the cell surface, heparin oligosaccharides have a significant impact on the highly dynamic behaviour of netrin-1. Remarkably, the monomer-dimer equilibrium of netrin-1 in solution is abolished in the presence of heparin oligosaccharides and replaced with highly hierarchical and distinct super assemblies leading to unique, yet unknown netrin-1 filament formation. In our integrated approach we provide a molecular mechanism for the filament assembly which opens fresh paths towards a molecular understanding of netrin-1 functions.
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