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RotoBOD─Quantifying Oxygen Consumption by Suspended Particles and Organisms.

Clarissa KarthäuserPaul D FucileAmy E MaasLeocadio Blanco-BercialHannah GossnerDaniel P LowensteinYuuki J NiimiBenjamin A S Van MooyJoan M BernhardKen O BuesselerStefan M Sievert
Published in: Environmental science & technology (2024)
Sinking or floating is the natural state of planktonic organisms and particles in the ocean. Simulating these conditions is critical when making measurements, such as respirometry, because they allow the natural exchange of substrates and products between sinking particles and water flowing around them and prevent organisms that are accustomed to motion from changing their metabolism. We developed a rotating incubator, the RotoBOD (named after its capability to rotate and determine biological oxygen demand, BOD), that uniquely enables automated oxygen measurements in small volumes while keeping the samples in their natural state of suspension. This allows highly sensitive rate measurements of oxygen utilization and subsequent characterization of single particles or small planktonic organisms, such as copepods, jellyfish, or protists. As this approach is nondestructive, it can be combined with several further measurements during and after the incubation, such as stable isotope additions and molecular analyses. This makes the instrument useful for ecologists, biogeochemists, and potentially other user groups such as aquaculture facilities. Here, we present the technical background of our newly developed apparatus and provide examples of how it can be utilized to determine oxygen production and consumption in small organisms and particles.
Keyphrases
  • gram negative
  • machine learning
  • multidrug resistant
  • high throughput
  • mass spectrometry
  • patient reported outcomes
  • liquid chromatography
  • tandem mass spectrometry