The Role of Flavobacterium enshiense R6S-5-6 in the Wetland Ecosystem Revealed by Whole-Genome Analysis.
Ahhyeon ChoiIn-Tae ChaKi-Eun LeeYoun Kyoung SonJaewoong YuDonghyeok SeolPublished in: Current microbiology (2023)
The wetland is an important ecosystem for purifying pollutants and circulating nutrients. Numerous microorganisms contribute to maintaining this function. We obtained Flavobacterium enshiense R6S-5-6 which was isolated from Ungok (Ramsar) Wetland and conducted whole-genome sequencing to investigate what contribution R6S-5-6 could make to the wetland community. The complete genome sequence of R6S-5-6 has a size of 3,251,289 bp with 37.68% of GC content. Gene annotation revealed that R6S-5-6 has several pathways to break down pollutants, including denitrification, assimilatory sulfate reduction (ASR), and polyphosphate-accumulating process. Furthermore, R6S-5-6 has genes that can have a positive effect on plants living in wetlands, such as storing essential nutrients, promoting plant growth, and protecting plants against pathogens.
Keyphrases
- wastewater treatment
- heavy metals
- antibiotic resistance genes
- plant growth
- climate change
- genome wide
- human health
- mental health
- healthcare
- genome wide identification
- water quality
- microbial community
- gene expression
- single cell
- copy number
- dna methylation
- antimicrobial resistance
- high resolution
- transcription factor
- genome wide analysis
- gram negative
- gas chromatography