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Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA.

Otso OvaskainenNerea AbregoBrendan FurneauxBess HardwickPanu SomervuoIsabella PalorinneNigel R AndrewUlyana V BabiyTan BaoGisela BazzanoSvetlana N BondarchukTimothy C BonebrakeGeorgina L BrennanSyndonia Bret-HarteClaus BässlerLuciano CagnoloErin K CameronElodie ChapurlatSimon CreerLuigi Paolo D'AcquiNatasha de VereMarie-Laure Desprez-LoustauMichel A K DongmoIda B Dyrholm JacobsenBrian L FisherMiguel Flores de JesusGregory S GilbertGareth W GriffithAnna A GritsukAndrin GrossHåkan GruddPanu HalmeRachid HannaJannik HansenLars Holst HansenApollon D M T HegbeSarah HillIan D HoggJenni HultmanKevin D HydeNicole A HynsonNatalia IvanovaPetteri KaristoDeirdre KerdraonAnastasia KnorreIrmgard Krisai-GreilhuberJuri KurhinenMasha KuzminaNicolas LecomteErin LecomteViviana LoaizaErik LundinAlexander MeireArmin MešićOtto MiettinenNorman MonkhausePeter MortimerJörg MüllerHenrik R NilssonPuani Yannick C NontiJenni NordénBjörn NordénClaudia PazPetri PellikkaDanilo PereiraGeoff PetchJuha-Matti PitkänenFlavius PopaCaitlin PotterJenna PurhonenSanna PätsiAbdullah RafiqDimby RaharinjanaharyNiklas RakosAchala R RathnayakaKatrine RaundrupYury A RebrievJouko RikkinenHanna M K RogersAndrey RogovskyYuri RozhkovKadri RunnelAnnika SaartoAnton SavchenkoMarkus SchlegelNiels Martin SchmidtSebastian SeiboldCarsten A SkjøthElisa StengelSvetlana V SutyrinaIlkka SyvänperäLeho TedersooJebidiah TimmLaura TiptonHirokazu TojuMaria Uscka-PerzanowskaMichelle van der BankF Herman van der BankBryan VandenbrinkStefano VenturaSolvi R VignissonXiaoyang WangWolfgang W WeisserSubodini Nuwanthika WijesingheS Joseph WrightChunyan YangNourou S YorouAmanda YoungDouglas W YuEvgeny V ZakharovPaul D N HebertTomas V Roslin
Published in: Scientific data (2024)
Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m 3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.
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